Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06341 |
Symbol | |
ID | 5558694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1508977 |
End bp | 1509759 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640910814 |
Product | hypothetical protein |
Protein accession | YP_001448459 |
Protein GI | 156977553 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCATC AATATCAAAT TACGATATTT CGTGCAGAGC AGTTACAGAA GCTGCGCAAT GTGAGGATTC ATTCCCCAAG CATTATTCAG ATCATTACGG GTAGTAAGCG CCTTTTCTGG AAGGAATCGG CGCTGGATAT TTCCCATTCT GAATTACTAC TTTGCGAAGC TTCTGCATCA CTGAGCTTTG AGAACTTGCC ACAGAAAGGG AAGTTTCTCT CCAGAATGTT TAGCTTCCAT TGCTTACCGA CGGACGCAAT GCTTGAATTG AGCATGCGTG TCGGAACAGG GGATGAATCG CCGAGATTAG CTGCAGATAA CTCGTTACAT GAGACGTTAA ACGCGCTGTA TGCTTTTGAA CAACATGGTA TGAGAAAAGA GACACAAACT TTTTGGGTCA TGGGTTTATA TCAGCAGCTT GCGGAACGTG GAGCATTACA CCACCTGTTT GTTAGCTCAA ACATCACATT CAGCCAAAAA TTGAGTCGTT ACTTATCCTT CTCTCCTGGT GAAGAACATT CGTTGGAAGA GGCTGCTGAA CGATTTGCCA TGAGCCGGGC AACCATGATC CGTAAACTCA AGCAAGAAGG GACTCAATAT CGAGAGGTGT TGGCAGAAGT ACGTTTAAAT CATGCATTGT ATTTAATGCA AAATGGCCAC TATAACGTTG CGATGTTGGC TCAACTTTGT GGCTATCAAT CGGAAGGTCG TTTTAGTCAG CGTTTTAAAG GTAAATTCGG TCTTACCCCG AGTGATTACA TCAAAACGGT GGTGATAAAT TAA
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Protein sequence | MSHQYQITIF RAEQLQKLRN VRIHSPSIIQ IITGSKRLFW KESALDISHS ELLLCEASAS LSFENLPQKG KFLSRMFSFH CLPTDAMLEL SMRVGTGDES PRLAADNSLH ETLNALYAFE QHGMRKETQT FWVMGLYQQL AERGALHHLF VSSNITFSQK LSRYLSFSPG EEHSLEEAAE RFAMSRATMI RKLKQEGTQY REVLAEVRLN HALYLMQNGH YNVAMLAQLC GYQSEGRFSQ RFKGKFGLTP SDYIKTVVIN
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