Gene VIBHAR_06341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06341 
Symbol 
ID5558694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1508977 
End bp1509759 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content43% 
IMG OID640910814 
Producthypothetical protein 
Protein accessionYP_001448459 
Protein GI156977553 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCATC AATATCAAAT TACGATATTT CGTGCAGAGC AGTTACAGAA GCTGCGCAAT 
GTGAGGATTC ATTCCCCAAG CATTATTCAG ATCATTACGG GTAGTAAGCG CCTTTTCTGG
AAGGAATCGG CGCTGGATAT TTCCCATTCT GAATTACTAC TTTGCGAAGC TTCTGCATCA
CTGAGCTTTG AGAACTTGCC ACAGAAAGGG AAGTTTCTCT CCAGAATGTT TAGCTTCCAT
TGCTTACCGA CGGACGCAAT GCTTGAATTG AGCATGCGTG TCGGAACAGG GGATGAATCG
CCGAGATTAG CTGCAGATAA CTCGTTACAT GAGACGTTAA ACGCGCTGTA TGCTTTTGAA
CAACATGGTA TGAGAAAAGA GACACAAACT TTTTGGGTCA TGGGTTTATA TCAGCAGCTT
GCGGAACGTG GAGCATTACA CCACCTGTTT GTTAGCTCAA ACATCACATT CAGCCAAAAA
TTGAGTCGTT ACTTATCCTT CTCTCCTGGT GAAGAACATT CGTTGGAAGA GGCTGCTGAA
CGATTTGCCA TGAGCCGGGC AACCATGATC CGTAAACTCA AGCAAGAAGG GACTCAATAT
CGAGAGGTGT TGGCAGAAGT ACGTTTAAAT CATGCATTGT ATTTAATGCA AAATGGCCAC
TATAACGTTG CGATGTTGGC TCAACTTTGT GGCTATCAAT CGGAAGGTCG TTTTAGTCAG
CGTTTTAAAG GTAAATTCGG TCTTACCCCG AGTGATTACA TCAAAACGGT GGTGATAAAT
TAA
 
Protein sequence
MSHQYQITIF RAEQLQKLRN VRIHSPSIIQ IITGSKRLFW KESALDISHS ELLLCEASAS 
LSFENLPQKG KFLSRMFSFH CLPTDAMLEL SMRVGTGDES PRLAADNSLH ETLNALYAFE
QHGMRKETQT FWVMGLYQQL AERGALHHLF VSSNITFSQK LSRYLSFSPG EEHSLEEAAE
RFAMSRATMI RKLKQEGTQY REVLAEVRLN HALYLMQNGH YNVAMLAQLC GYQSEGRFSQ
RFKGKFGLTP SDYIKTVVIN