Gene VIBHAR_06333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06333 
Symbol 
ID5557954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1504427 
End bp1505071 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content48% 
IMG OID640910806 
ProductRNA-directed DNA polymerase 
Protein accessionYP_001448451 
Protein GI156977545 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAA TCTGCTCCTC AACCAACCTG AATCAAGCTT TACGAAGAGT GAAGAAGAAC 
AAGGGATGTG CAGGTGTCGA CAAACTCGAC ATAGATGCAA CTATCTTTAA GCTTCGACAA 
GCTTCAAACG GGCAAGCGCT TCGCCAGAGT CTTCTGGATG GAAGCTACCG ACCTCAACCC 
GTTCTTGGTG TGGGAATCCC CAAACCGAGT GGTGGCGTCA GACAACTAGG TATCCCAACA 
GTGCTCGATA GAATTGTCCA ACAGGCAATC ACCTCAGTAC TGTCAGATAT CTATGAAGCT 
AAGTTCTCCA ATAGCAGTTA CGGATTTAGA CCCAACCGCA GTGCACATCA TGCGCTAGCG 
GCAGCCAGTC GCTACATCCG AGAGGGGCGA GGTTATGTAG TAGATATCGA CCTAGCGAAA 
TACTTCGATA CCGTTAATCA CGATAGACTG ATGCACAGAC TGTCAGAGGA TATCGCGGAT 
AAACGAGTGT TGAAGCTCAT CAGGTCATAT CTACAGGCAG GCATAATGCG AAACGGTTTA 
GTCGAACAGA GACAACGAGG GACACCACAG GGTGGTCCAT TATCTCCGTT GCTATCCGAT 
ATCGTATTAG ATGAACTGGA TAAAGAGCTA GAGCGTAGAG GCTGA
 
Protein sequence
MEQICSSTNL NQALRRVKKN KGCAGVDKLD IDATIFKLRQ ASNGQALRQS LLDGSYRPQP 
VLGVGIPKPS GGVRQLGIPT VLDRIVQQAI TSVLSDIYEA KFSNSSYGFR PNRSAHHALA 
AASRYIREGR GYVVDIDLAK YFDTVNHDRL MHRLSEDIAD KRVLKLIRSY LQAGIMRNGL 
VEQRQRGTPQ GGPLSPLLSD IVLDELDKEL ERRG