Gene VIBHAR_06310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06310 
Symbol 
ID5557995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1486054 
End bp1486701 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content48% 
IMG OID640910783 
Producthypothetical protein 
Protein accessionYP_001448428 
Protein GI156977522 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATATG GCGCCTTTCT GCTTGCTCTC CTAGCAGGCT GCGTCAATGC CGTAGGTCTT 
CTCGGCTTTC AACATCAAGC GATAACGCAT CTCTCCGGAA CCGTAACTCA GCTAGGGAAT 
AGCTTACTAA CAGGTGTGGA CTCAACCATC CACCTGCTTT TTATTGTATT CAGCTTTTTG 
ATTGGCTCTG CGTTTAGCGG ATTCTTTATC GAAAGTAGCG CTCTAAAGCT CGGCCGCCGC 
TATGGTGTGG CACTATGTAT CGAAGGTAGC TTACTACTTT TGAGCTTGGG CTTTTTAGTA 
CAAGGTAACG TGTATGGTCA GTACCTTGCT TCTGCAGCCT GTGGTTTGCA GAATGCGATG 
ATAACCACCT TCAGCGGTGC CGTTGTAAGG ACGACACACA TGACTGGCAT CATTACCGAC 
CTAGGTATCA TGATTGGAGA AAGCCTACGT GGACGTCAAT TCGACCGACG TAAAGCCAAA 
CTGTTTATCT TCATTTTCTT TGGCTTCTTA CTCGGTGGTA CGGTTGGTGC TGGTTTGTTT 
AACGTTTTTG AACTGTACGC ATTAGCCTTC CCTGCGCTTC TCGCTTTCGT TATCGCTATC 
GCATACTGGG GCTACCTCTA CCTACAGAGC CGCCATCAAC CAGTCTAG
 
Protein sequence
MEYGAFLLAL LAGCVNAVGL LGFQHQAITH LSGTVTQLGN SLLTGVDSTI HLLFIVFSFL 
IGSAFSGFFI ESSALKLGRR YGVALCIEGS LLLLSLGFLV QGNVYGQYLA SAACGLQNAM 
ITTFSGAVVR TTHMTGIITD LGIMIGESLR GRQFDRRKAK LFIFIFFGFL LGGTVGAGLF 
NVFELYALAF PALLAFVIAI AYWGYLYLQS RHQPV