Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06306 |
Symbol | |
ID | 5557925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1483259 |
End bp | 1484578 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640910779 |
Product | peptidase |
Protein accession | YP_001448424 |
Protein GI | 156977518 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCTTG TTATAAAGGA GATAGTAATT CCCGTGTCTA CAAATGAAGT TACAACAAGA CGGTTGCCGA ATCTGACAAG TCGTAAAGCG CTACTGTTGT ACTCCTTGCC AGTATTAGTT GCGATTGGTG TTTCCAACTC TCTCAAAGAG TCTTCCCTTA CTAAAACCAT CGCATTGAAC CTGCCTGAAA CGCAGGTTGT CGAAAATATT CTTGATGCGA CAACAGCAGA AGTTGTCACT CCACCAAATT TTGAATACCA AATCCAAGCA GGTGATAACC TGAGTACCAT TTTCAGCCAA CTAGGCTTAG GCTACAGCTC GTTGATGAAA GTGATGGAAA CGGATTTGAA CTTCCTTGCT CTTGATACCT TGAAACCTGG TAACACACTG CGTTTTTGGC GCAATGAATC TACGGGCGAA CTTGAAAAAA TGGAACTGCA ATTCTCTATT GCAGATAAAG TGGTTTACCA TCGTAATGAC GATGGCAGCT ACGATTTCTC AGACATCTCA ATTCCTGGTG TTTGGACGCA AGAGCCTTTG GTCGGTGTTA TTCGAGGTAG CTTCTCGTCA TCCGCAAATC GTTTGGGCTT GAGCTCAGCA GAAATCAGTC AAGTGGTTAA CTTACTTAAA GAGCAAGTGA ACTTCGGCAA AGATTTACGC GCTGGTGACC GGTTTGAAGT GGTTCGCCGC TCTCAAAGTA TTGATGGTGT GCCAACTGGC AAGAACGAAA TAGAAGCAAT CAAAATTTAT AACCGTGGTC GTGAAGTCAC CGCTTACCTT CACACTGACG GTCAATTCTA CAATGCGAAA GGTGAGAGCC TTCAGCGTGC TTTCCAACGT TACCCTGTTA GCCGAGGCTG GCGCATCAGT TCTGGATTCA ACCCTAAACG TCTTCACCCT GTAACGGGCC GTGTAGCACC ACATAACGGA ACAGACTGGG CGGTACCGAC AGGAACACCT GTAGAGGCAA CGGGTGATGG TACCGTGATC ATGACTCGCA AACACCCGTA CGCAGGTAAC TATGTGGTGA TTGAGCATGG TAGTAAGTAC AAAACTCGTT ACTTACACTT AAGTAAGATC TTAGTGAAGA AAGGGCAGAA GGTCTCTCGT GGTCAACGCA TTGGCTTGTC AGGTAAGACT GGCCGTGTGA CTGGTCCGCA CCTTCACTAC GAGTTGATCG AATACGGCCG TCCGGTGAAC GCAATGCGCG CGAAGATCCC AATGGCAAGC TCAGTGCCTA AGAAAGAAAT GGCGAGCTTC ATTACGAACC GTAATGAAAT GGACAAGCTG TTAAAAGATA AAGAAAAAGC CGTTCTATAA
|
Protein sequence | MSLVIKEIVI PVSTNEVTTR RLPNLTSRKA LLLYSLPVLV AIGVSNSLKE SSLTKTIALN LPETQVVENI LDATTAEVVT PPNFEYQIQA GDNLSTIFSQ LGLGYSSLMK VMETDLNFLA LDTLKPGNTL RFWRNESTGE LEKMELQFSI ADKVVYHRND DGSYDFSDIS IPGVWTQEPL VGVIRGSFSS SANRLGLSSA EISQVVNLLK EQVNFGKDLR AGDRFEVVRR SQSIDGVPTG KNEIEAIKIY NRGREVTAYL HTDGQFYNAK GESLQRAFQR YPVSRGWRIS SGFNPKRLHP VTGRVAPHNG TDWAVPTGTP VEATGDGTVI MTRKHPYAGN YVVIEHGSKY KTRYLHLSKI LVKKGQKVSR GQRIGLSGKT GRVTGPHLHY ELIEYGRPVN AMRAKIPMAS SVPKKEMASF ITNRNEMDKL LKDKEKAVL
|
| |