Gene VIBHAR_06278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06278 
Symbol 
ID5558652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1458814 
End bp1459446 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content45% 
IMG OID640910752 
Productputative threonine efflux protein 
Protein accessionYP_001448397 
Protein GI156977491 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATT TATCTGTACT TCCTGTTTAT CTCCCCGCCG TTGTTGCACT TCTTTTGTTG 
CCTGGACCTG ACATGTTGCT GATTGCTAGC TCTAGCATGA GCTATGGTAA GAAAGTCGGT 
TTGTTTGCGA GCTTGGGCAA TGCGACGTCG GGTGTGATTT TGACCCTATT GGCAGCAATG 
GGTGTCTCGA CCTTGATTGC GATGAGCCCA ATAGCGTTAA AAGTGCTTCA TCTACTGGGT 
GGCGCGTACT TACTAAAAAT GGGCTGGGAC TGTTTAAGAG CGGATGTTTC TGCTGCACCA 
GAGCTTGATC AGAAAAACAA AATGGCATCG ACTTACTATC AACGTGCTAT GATAAGTAAC 
CTGTTGAACC CTAAGGCGTT GGTGTTCTTC GTGATGTTTT TACCTCAGTT TGTCTCTAGC 
AACATTACTG CATCTTCGGG TGAGCAAATG CTTGCGCTTG GTTTGCTGTT AAACGTACTC 
GGTTTGCTAT TCAACATCTT GCTGGTTGCT CTGGCAGGTA CACTGGGTAA AGGGTTGTTG 
GAAAATGACA AATTCCGTAT GTACCAAGGC AAACTGATGG GCTTGGTGTT CATTATCCTT 
GCGATATGGA TGCTCAGTAG CTTTGCGATG TAA
 
Protein sequence
MIDLSVLPVY LPAVVALLLL PGPDMLLIAS SSMSYGKKVG LFASLGNATS GVILTLLAAM 
GVSTLIAMSP IALKVLHLLG GAYLLKMGWD CLRADVSAAP ELDQKNKMAS TYYQRAMISN 
LLNPKALVFF VMFLPQFVSS NITASSGEQM LALGLLLNVL GLLFNILLVA LAGTLGKGLL 
ENDKFRMYQG KLMGLVFIIL AIWMLSSFAM