Gene VIBHAR_06261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06261 
Symbol 
ID5558729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1444011 
End bp1445063 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content47% 
IMG OID640910735 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001448380 
Protein GI156977474 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCAAA CTGATGATGT AAGAATTAAC AAAGTAAAAG AGCTATTGCC ACCTGTTGCA 
GTGCTCGAGA AATTTCCGGC AACCGAAACT GCTTCCACAA CGACGTTTGA ATGTCGCAAC 
GCCATCCACA ATATTCTTGA AGGCAAAGAT GACCGCTTGC TGGTTATTGT TGGTCCGTGT 
TCTATTCACG ATCCAGAAGC CGCGGTTGAG TATGGTAAGA AATTGAAAGT ACTTCGCGAT 
GAACTCGGTG AGCAACTAGA AGTAGTGATG CGCGTTTACT TTGAAAAACC GCGCACAACG 
GTAGGTTGGA AAGGCCTAAT TAACGACCCG TACCTAAATG ACACTTACAA GCTAAACGAC 
GGTCTTCGTA TTGGTCGTAA GCTGTTGCTT GACTTAACAG ACATGGGCCT TCCTACTGCA 
AGCGAATTCC TAGATATGAT CACGCCACAG TACGTAGCGG ACCTTATTAG CTGGGGTGCT 
ATCGGTGCAC GTACGACTGA ATCTCAGGTA CACCGTGAGC TAGCGTCAGG TTTGTCTTGC 
CCAGTTGGCT TCAAAAACGG TACAGACGGC AACATCAAAA TCGCGAGTGA TGCAATCCGT 
TCAGCAAGCG CATCTCACCA CTTCTTATCA GTTACTAAGT ACGGTCACTC TGCGATTGTT 
GAAACGGCGG GTAACCCTGA TTGTCATATC ATCCTTCGTG GTGGTAAAGA GCCTAACTAC 
AGTGCGTCTC ATGTAGCGCA AATCAAAGAC GAGCTAGACG CGGCGGGTCT ACCGAAGAAA 
GTGATGATCG ACTTTAGTCA CGCTAACAGC TCTAAGCAGT TCAAACGTCA GATGTTGGTG 
TCTGATGACG TATCAGAGCA GATCTCTGGC GGCGAAGATG CTATTTTTGG CGTGATGATC 
GAATCTCATC TTGTTGAAGA TCGTCAGGAC TTAGTTGACG GTAAGGCAGC AACTTACGGG 
CAATCCATTA CTGATGCATG TATCGGTTGG GAAGATACTG AAACCGTTCT ACGTCAGCTA 
TCGGATGCAG TAAAAGCACG TCGCGCTAAG TAA
 
Protein sequence
MFQTDDVRIN KVKELLPPVA VLEKFPATET ASTTTFECRN AIHNILEGKD DRLLVIVGPC 
SIHDPEAAVE YGKKLKVLRD ELGEQLEVVM RVYFEKPRTT VGWKGLINDP YLNDTYKLND 
GLRIGRKLLL DLTDMGLPTA SEFLDMITPQ YVADLISWGA IGARTTESQV HRELASGLSC 
PVGFKNGTDG NIKIASDAIR SASASHHFLS VTKYGHSAIV ETAGNPDCHI ILRGGKEPNY 
SASHVAQIKD ELDAAGLPKK VMIDFSHANS SKQFKRQMLV SDDVSEQISG GEDAIFGVMI 
ESHLVEDRQD LVDGKAATYG QSITDACIGW EDTETVLRQL SDAVKARRAK