| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06257 |
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| Symbol | |
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| ID | 5558355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 1437257 |
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| End bp | 1439263 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640910731 |
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| Product | transketolase |
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| Protein accession | YP_001448376 |
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| Protein GI | 156977470 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGCT CTCTTCTAAC ACGAAAGTAT CTAGCTAATG CAATCCGTGC ACTGAGCATG
GACGGTGTTC AACAAGCTAA CTCTGGTCAC CCAGGTGCAC CTATGGGTAT GGCTGACATC
GCTGAAGTTC TTTGGCGTTC TCACCTAAAC CACAACCCAT CAAACCCAGA GTGGGCTGAC
CGCGACCGTT TCGTACTGTC TAACGGCCAC GGCTCTATGC TTATCTATTC TCTACTGCAC
CTTGCAGGCT ACGAGCTATC TATCGACGAT CTTAAAAACT TCCGTCAGCT TCACTCTAAG
ACTCCTGGTC ACCCAGAGTA CGGCTACGCA CCTGGTATCG AAACAACAAC GGGTCCTCTA
GGTCAAGGCA TCACTAACGC TGTTGGTATG GCAATGGCTG AGAAAGCACT AGCGGCTCAG
TTCAACAAAG AAGGCCACGA CATCGTTGAC CACTTCACTT ACGTGTTCAT GGGTGACGGC
TGTCTAATGG AAGGTATCTC GCACGAGGCT TGTTCTCTTG CTGGTACACT AGGCCTTGGC
AAACTGATCG CATTCTGGGA TGACAACGGT ATCTCTATCG ATGGTCACGT TGAAGGTTGG
TTCTCTGACG ATACACCTAA GCGTTTTGAA TCTTACGGCT GGCACGTAAT CCCTGCTGTG
GATGGTCACG ACTCTGAAGC GATCAACGCA GCAATCGAAG CGGCAAAAGC AGATCCACGC
CCTACACTTA TCTGTACTAA AACTATCATC GGTTTTGGTT CTCCAAACAA ATCTGGTTCA
CACGACTGTC ACGGTGCGCC ACTAGGTGCT GAAGAAATTG CAGCGACACG TAAAGAACTA
GGTTGGGAGC ACGGTCCTTT TGAAATTCCG CAGGAAGTCT ACGCAGAGTG GTCAGCGAAA
GAAGCAGGCG CAGCTAAGGA AGCTGCGTGG GACGAGAAAT TTGCAGCTTA TGAAGCAGCG
TACCCTGAGC TGGCAGCTGA ATTCAAACGC CGCGTAAACG GTGACCTACC AGCTGAGTGG
GAAGAGAAAG CAAACCAAAT CATTGCTGAC CTTCAAGCAA ACCCAGCAAA CATCGCATCA
CGTAAAGCAT CTCAAAACGC ACTAGAAGCG TTTGGTCAAA TGCTTCCAGA ATTCATGGGC
GGCTCTGCTG ACCTAGCGCC TTCTAACCTA ACTATGTGGT CTGGTTCTAA GTCTCTAGAA
GCGAACGACT TCTCTGGTAA CTACATCCAC TACGGTGTAC GTGAATTTGG TATGACAGCG
ATCATGAACG GTATCGCGCT ACACGGCGGT TTTGTTCCTT ACGGCGCAAC ATTCCTAATG
TTCATGGAAT ACGCACGTAA CGCTATGCGT ATGGCTGCTC TGATGAAGAT TCAGAACATC
CAGGTTTACA CGCACGACTC TATCGGTCTT GGCGAAGATG GCCCAACTCA CCAACCTGTT
GAGCAAATCG CGTCTCTACG CCTGACTCCA AACATGAGCA CGTGGCGTCC ATGTGACCAA
GTTGAGTCTG CAGTAGCATG GAAACTGGCG ATTGAACGTA AAGATGCACC ATCTGCACTT
ATCTTCTCTC GTCAAAACCT AGCACAGCAA GAGCGTACTG CTGAGCAAGT TGCAGACATC
GCAAAAGGTG GCTACATCCT GAAAGACAGC GATGGTAAAC CTGAGCTAAT CCTTATCGCG
ACTGGTTCAG AAGTTGAGCT AGCTGTGAAA GCGGCAGAAC AACTAACGGC TGAAGGTAAG
AAAGTACGCG TGGTTTCAAT GCCAGCTACT GATACTTTCG ACAAGCAAGA CGCGGCTTAC
CGTGAATCTG TACTGCCATC AGACGTAACG GCACGTATCG CTGTAGAAGC GGGCATTGCT
GACTTCTGGT ACAAGTACGT TGGCTTCGAC GGTCGCATCA TCGGTATGAC AACATTCGGT
GAGTCTGCAC CAGCTGACCA CCTGTTCGAA ATGTTTGGTT TCACTGTAGA AAACGTAGTG
AACACAGCAA AAGAACTGCT AGCTTAA
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| Protein sequence | MDRSLLTRKY LANAIRALSM DGVQQANSGH PGAPMGMADI AEVLWRSHLN HNPSNPEWAD
RDRFVLSNGH GSMLIYSLLH LAGYELSIDD LKNFRQLHSK TPGHPEYGYA PGIETTTGPL
GQGITNAVGM AMAEKALAAQ FNKEGHDIVD HFTYVFMGDG CLMEGISHEA CSLAGTLGLG
KLIAFWDDNG ISIDGHVEGW FSDDTPKRFE SYGWHVIPAV DGHDSEAINA AIEAAKADPR
PTLICTKTII GFGSPNKSGS HDCHGAPLGA EEIAATRKEL GWEHGPFEIP QEVYAEWSAK
EAGAAKEAAW DEKFAAYEAA YPELAAEFKR RVNGDLPAEW EEKANQIIAD LQANPANIAS
RKASQNALEA FGQMLPEFMG GSADLAPSNL TMWSGSKSLE ANDFSGNYIH YGVREFGMTA
IMNGIALHGG FVPYGATFLM FMEYARNAMR MAALMKIQNI QVYTHDSIGL GEDGPTHQPV
EQIASLRLTP NMSTWRPCDQ VESAVAWKLA IERKDAPSAL IFSRQNLAQQ ERTAEQVADI
AKGGYILKDS DGKPELILIA TGSEVELAVK AAEQLTAEGK KVRVVSMPAT DTFDKQDAAY
RESVLPSDVT ARIAVEAGIA DFWYKYVGFD GRIIGMTTFG ESAPADHLFE MFGFTVENVV
NTAKELLA
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