Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06254 |
Symbol | |
ID | 5558568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1433293 |
End bp | 1434588 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640910728 |
Product | chitinase |
Protein accession | YP_001448373 |
Protein GI | 156977467 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3325] Chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA CACTTCTCGC AGCTGCATTA TTTACGGGGC TTACAGGTAT TGCACAAGCT GAGCAAAAAG TCGTGGCAGG CTATTTTGCC GATTGGCAGT ACGCAAATGC AGACAATCCA TACAAGGTTA AAGACATTCC GGCTGATAAC CTGACTCACA TTATCTACGC ATTTTTAAGT ATGTGTGTTC CTCACACTGG TGCTTCGGAA AATATTCAAA AGCTGGTTGC AAAGCACTGT GAAGGCAAAG AACCGTATAC GGCGATTTTG GTTGATACCG AGGCGGCACT TGAAAAAGAC TTTGGTCCGG TCTCTGTAGA CGTTCCATAT AAAGGGCACT TCGCCCAATT GGCCGAACTT AAGAAGCAAC ATCCTGATCT AAAAATTCTT CCTTCTTTTG GCGGTTGGAC CATGTCTGAA CCTTTCCACG CTATGGCTAA AAACCAGCAA GCAATGGATC AGTTCTCGAA AACGGCGGTC GAGTTGATTG CAAAGTACGA TTTTTTTGAT GGCATTGACT TGGACTGGGA ATATCCAGGT GGTGGCGGTT TGACTACGTC TCCTTGGAGT CCAGATACCA AGCTGACGGA TGAGCAAAAA GCATTAGAGC GTGATGCCTT CACTTACCTA GTTAAAACCA TGCGTGGTGA TCTAGATACA CTAGCGAAAA AGACCAAGCG TGAGTACGAG CTTTCAACAG CGGTGGGTGT TGGTCCTAAA GCAGCAGGTA TTGACTGGAA AGCGGCGCAG CCTTACCTAA CCAACATGTT TGCGATGACA TACGACTTCC TTGGCGGTTG GGGGCAACAG ACAGGGCATA CGACTAACCT ACATGCGACC GACCGCAGTT GGTGGGGAAT GGGCGCAGAC GTGTTCATTA ATCAAATGAT TGAGCTGGGT ATTCCTAGTG AGAAGTTGGT GATTGGTGCC GCGTTTTATG GTCGTGGTTG GCAAGGAACT AAAGATTTTG CCGGTGGTTT ACCAACTCAA GACTTATTAT CGGAGAAAGG CGCACAGTTT GGTACTGGTG AGAATGGCTA CTTCATGTTC TGGGATCTGA TGAAGAACTA CAGTGTGAAA CAAGGATATG AGTACAAATA TGATGAGCAA GCTCAAGCGC CATACTTATG GAACCCAGAC AAGAAGGTGT TTATCTCATT TGAAGATCAG CGATCTATCA AAGCCAAAGC AGACTGGGCG AAACAATCTA ACTTAGGCGG AATCTTTACA TGGGAACTGT CAGGAGATCC GAAAGGAGAG TTAGTCGAAG TGATGTATAA GGAAATGCAG AACTAG
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Protein sequence | MKKTLLAAAL FTGLTGIAQA EQKVVAGYFA DWQYANADNP YKVKDIPADN LTHIIYAFLS MCVPHTGASE NIQKLVAKHC EGKEPYTAIL VDTEAALEKD FGPVSVDVPY KGHFAQLAEL KKQHPDLKIL PSFGGWTMSE PFHAMAKNQQ AMDQFSKTAV ELIAKYDFFD GIDLDWEYPG GGGLTTSPWS PDTKLTDEQK ALERDAFTYL VKTMRGDLDT LAKKTKREYE LSTAVGVGPK AAGIDWKAAQ PYLTNMFAMT YDFLGGWGQQ TGHTTNLHAT DRSWWGMGAD VFINQMIELG IPSEKLVIGA AFYGRGWQGT KDFAGGLPTQ DLLSEKGAQF GTGENGYFMF WDLMKNYSVK QGYEYKYDEQ AQAPYLWNPD KKVFISFEDQ RSIKAKADWA KQSNLGGIFT WELSGDPKGE LVEVMYKEMQ N
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