Gene VIBHAR_06254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06254 
Symbol 
ID5558568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1433293 
End bp1434588 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content46% 
IMG OID640910728 
Productchitinase 
Protein accessionYP_001448373 
Protein GI156977467 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3325] Chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CACTTCTCGC AGCTGCATTA TTTACGGGGC TTACAGGTAT TGCACAAGCT 
GAGCAAAAAG TCGTGGCAGG CTATTTTGCC GATTGGCAGT ACGCAAATGC AGACAATCCA
TACAAGGTTA AAGACATTCC GGCTGATAAC CTGACTCACA TTATCTACGC ATTTTTAAGT
ATGTGTGTTC CTCACACTGG TGCTTCGGAA AATATTCAAA AGCTGGTTGC AAAGCACTGT
GAAGGCAAAG AACCGTATAC GGCGATTTTG GTTGATACCG AGGCGGCACT TGAAAAAGAC
TTTGGTCCGG TCTCTGTAGA CGTTCCATAT AAAGGGCACT TCGCCCAATT GGCCGAACTT
AAGAAGCAAC ATCCTGATCT AAAAATTCTT CCTTCTTTTG GCGGTTGGAC CATGTCTGAA
CCTTTCCACG CTATGGCTAA AAACCAGCAA GCAATGGATC AGTTCTCGAA AACGGCGGTC
GAGTTGATTG CAAAGTACGA TTTTTTTGAT GGCATTGACT TGGACTGGGA ATATCCAGGT
GGTGGCGGTT TGACTACGTC TCCTTGGAGT CCAGATACCA AGCTGACGGA TGAGCAAAAA
GCATTAGAGC GTGATGCCTT CACTTACCTA GTTAAAACCA TGCGTGGTGA TCTAGATACA
CTAGCGAAAA AGACCAAGCG TGAGTACGAG CTTTCAACAG CGGTGGGTGT TGGTCCTAAA
GCAGCAGGTA TTGACTGGAA AGCGGCGCAG CCTTACCTAA CCAACATGTT TGCGATGACA
TACGACTTCC TTGGCGGTTG GGGGCAACAG ACAGGGCATA CGACTAACCT ACATGCGACC
GACCGCAGTT GGTGGGGAAT GGGCGCAGAC GTGTTCATTA ATCAAATGAT TGAGCTGGGT
ATTCCTAGTG AGAAGTTGGT GATTGGTGCC GCGTTTTATG GTCGTGGTTG GCAAGGAACT
AAAGATTTTG CCGGTGGTTT ACCAACTCAA GACTTATTAT CGGAGAAAGG CGCACAGTTT
GGTACTGGTG AGAATGGCTA CTTCATGTTC TGGGATCTGA TGAAGAACTA CAGTGTGAAA
CAAGGATATG AGTACAAATA TGATGAGCAA GCTCAAGCGC CATACTTATG GAACCCAGAC
AAGAAGGTGT TTATCTCATT TGAAGATCAG CGATCTATCA AAGCCAAAGC AGACTGGGCG
AAACAATCTA ACTTAGGCGG AATCTTTACA TGGGAACTGT CAGGAGATCC GAAAGGAGAG
TTAGTCGAAG TGATGTATAA GGAAATGCAG AACTAG
 
Protein sequence
MKKTLLAAAL FTGLTGIAQA EQKVVAGYFA DWQYANADNP YKVKDIPADN LTHIIYAFLS 
MCVPHTGASE NIQKLVAKHC EGKEPYTAIL VDTEAALEKD FGPVSVDVPY KGHFAQLAEL
KKQHPDLKIL PSFGGWTMSE PFHAMAKNQQ AMDQFSKTAV ELIAKYDFFD GIDLDWEYPG
GGGLTTSPWS PDTKLTDEQK ALERDAFTYL VKTMRGDLDT LAKKTKREYE LSTAVGVGPK
AAGIDWKAAQ PYLTNMFAMT YDFLGGWGQQ TGHTTNLHAT DRSWWGMGAD VFINQMIELG
IPSEKLVIGA AFYGRGWQGT KDFAGGLPTQ DLLSEKGAQF GTGENGYFMF WDLMKNYSVK
QGYEYKYDEQ AQAPYLWNPD KKVFISFEDQ RSIKAKADWA KQSNLGGIFT WELSGDPKGE
LVEVMYKEMQ N