| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06253 |
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| Symbol | |
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| ID | 5558567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 1430960 |
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| End bp | 1433251 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640910727 |
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| Product | sensory transduction protein kinase |
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| Protein accession | YP_001448372 |
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| Protein GI | 156977466 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGCA TAAAGAAGAA CATTTGGACG CTCTACATGA CGCTGTTTGC GATAAGTGTG
GGTTTGTTCT CTCTGTTTGG TCATTATCAT TACGAAGCAA CTCTCGATAA GTACAAAGAT
AAGCAGCTCT TACAATTAGA GCTGTTTGCC TCCTCCGTCG AGTCTTTGTT CAAAGGACAA
GAAACGCTGT TGGAAGTAGT TGGGCACCAA CTGATAGAGC AAAACGACTT CACTCGAACG
GCTTCCCTTC AAATGCGTCC CTTGCTTGAT GATTTGATGG ATATCCACCC TGTTATCGCC
GCTTTTGGCC TGACTAACCC TGAGGGGGAT TATCTGGCCA TCAGCTCTAA TCTGGATTTA
CAAAAACTAC AAAACCTAAG GCAAGATCCT CAAACCAAAG GGACATTCGA AGCTGCACTT
CAAGCCCAAC ACATGGTGGT TGGCAGAACC TATTTCATGC CCGCACTCGA TTCATTAGTG
ATCCCTATCC GAAAGGCAAT TCGAAATAAG AATGGGGACG TAATAGCAGT AATGACAGCG
GGGTTTAACA TGAACTCCTC CTTAGTGTTC AGAAACGACG TGCATGCCAA TAAACACAAT
CGCGTATCAT TAGTTCGTGA AGACGGTTAC CTTACTTTTA CCTCCGCGGA GCAATCTAAT
CTATTCAGCT ATACGCTCCC TGCAGATGGA CAGATAAAAG CGATTGTCTT TGAGCAAGTC
GAGAAAAAGT ACGACTGGAG CCGCGATACC GTAAAGAGCT TATCAAGTGC GGTAAACATT
GTTGCCGATG ACCCAAGAAT CAATCAACTG GTGACACTTA AGTATTTACC TGATTACAAA
CTTTGGGCTT CCTCTTCAAC CGATCTACGC TACATCCAAC GTGGCTTCTT CGATCAGTTT
GCTCTCTATT CCATCGTTTT TCTTTTTATC CAAGCAGGTT TCTATGCACT GGTTCGCTCA
ATTGCGAATA ACGAGCTCGC AACGCGACAA AAACTGCTTT ATCAGGCGCA TCATGATCAT
TTAACACTAC TGCCTAACCG TGAATATCTG AGAGCACACA TCACAAGATG GCTGAATGAA
ACTTCAGATC CATTTGCTTT GATGTTCATT GATATCGATA ACTTCAAATC AGTAAACGAC
ACACATGGCC ATGAATTTGG TGACGAAGTG CTCAAGCAAA TAGCGCTGCG CTTGAAGAGT
TTCGACAGTG AAGACCGATT GATTGTTAGA GAGGCGAGCG ATGAATTCAT CTTACTTGTC
AATCAAACAG ACGACAGCGT AGTAAGGACG CTAGCAAGCG ATCTTATTCA TTACCTATCC
GAACCTTACA TCGTTCACGA AAACCAGTTC CTTCTCAGTT CTAGCGTCGG TGTTGCGCTC
TATCCTTCGC ATGGCAAAAG TTTGGATGCG CTACTTCGCT CAGCGGATAT CGCCATGTAT
CAAGCCAAAA AGGATCGTAA CGCTTACAGT ATTTTCGACC AACAAATGCA AGCGAAGCAC
CTCCATAAGA TGAAGATAGA GCAACGTTTA AGGCTCGCTA TCGAAAGGCA AAGTTTGTTT
TTGGTGTATC AGCCACAGTT GAACAGAGAT GGTGAAATCT ATGGCGTTGA GGCGCTTGTT
CGCTGGCAGG ACGAAGAGCT TGGATTTGTA CCGCCAAACG AGTTCATTCC GGTCGCCGAG
AGCTCAGGTT TGATGGTAAG ACTCGGAGAG TTAATCATAG AGAAAAGTTT CGTCGATATG
GCACGTTTAA CAGGGCGTGT AAAACAGTCT ATCCAGATGT CGATTAATAT CTCGGTCAAA
CAATTTATCC AAGTCAACTT CATTGAGGAT CTGGTGGCCA TGATTGATAG ACATAAGGTG
AAACACAGTC GCATCACACT GGAAATTACT GAGAACCTGT TCATCGAGGA CCTCGAAAAA
TTTGCGCCAA TTTGCCAACG TCTACATTCG CTAGGCTTTA AGCTCTCTCT GGATGACTTC
GGTACTGGCT ACTCTTCCCT TTCGATGCTT AAAGCATTGC CAATTGATGA AGTCAAAATC
GATAAGAGCT TTGTCGATAA CATTGAGAAC GATGAAAAAG CACTGAACAT GGTGCAAAAC
ATCATTGCGA TTGGTAAAAA CTTTGGGATG AAGGTGCTTG CTGAAGGTGT GGAAACTCGC
CATCAACGTG ATCAACTTAC TGCTTGCGGT TGTGATTTGA TTCAAGGCTA CTTCTATTCC
AAACCATTGC CTTTTGAGCA GTTGATTAGC TTTGCCGAAG AGAACCACAA CGAAAAAGCC
GTCGAACAAT AA
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| Protein sequence | MIGIKKNIWT LYMTLFAISV GLFSLFGHYH YEATLDKYKD KQLLQLELFA SSVESLFKGQ
ETLLEVVGHQ LIEQNDFTRT ASLQMRPLLD DLMDIHPVIA AFGLTNPEGD YLAISSNLDL
QKLQNLRQDP QTKGTFEAAL QAQHMVVGRT YFMPALDSLV IPIRKAIRNK NGDVIAVMTA
GFNMNSSLVF RNDVHANKHN RVSLVREDGY LTFTSAEQSN LFSYTLPADG QIKAIVFEQV
EKKYDWSRDT VKSLSSAVNI VADDPRINQL VTLKYLPDYK LWASSSTDLR YIQRGFFDQF
ALYSIVFLFI QAGFYALVRS IANNELATRQ KLLYQAHHDH LTLLPNREYL RAHITRWLNE
TSDPFALMFI DIDNFKSVND THGHEFGDEV LKQIALRLKS FDSEDRLIVR EASDEFILLV
NQTDDSVVRT LASDLIHYLS EPYIVHENQF LLSSSVGVAL YPSHGKSLDA LLRSADIAMY
QAKKDRNAYS IFDQQMQAKH LHKMKIEQRL RLAIERQSLF LVYQPQLNRD GEIYGVEALV
RWQDEELGFV PPNEFIPVAE SSGLMVRLGE LIIEKSFVDM ARLTGRVKQS IQMSINISVK
QFIQVNFIED LVAMIDRHKV KHSRITLEIT ENLFIEDLEK FAPICQRLHS LGFKLSLDDF
GTGYSSLSML KALPIDEVKI DKSFVDNIEN DEKALNMVQN IIAIGKNFGM KVLAEGVETR
HQRDQLTACG CDLIQGYFYS KPLPFEQLIS FAEENHNEKA VEQ
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