Gene VIBHAR_06238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06238 
Symbol 
ID5558523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1419098 
End bp1419790 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content47% 
IMG OID640910712 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_001448357 
Protein GI156977451 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCAA CGTCACTACT AGATGAGTTT GGCACTCCAG TACAAAGGGT AGAAAGAGCG 
ATTGAGGCTC TGAAAAATGG CCTTGGTGTT CTATTAATGG ATGATGAGGA TCGCGAGAAC 
GAAGGCGACC TTATCTTCTC TGCACAGCAT CTTACCGAAG CGCAAATGGC ACTCATGATT 
CGTGAATGCA GTGGCATCGT GTGTTTGTGC TTAACGGAGG AACGCGCCAA TTGGTTAGAG 
CTTCCTCCTA TGGTGAAAGA TAATCGCAGT AAAAACCAGA CCGCTTTTAC GGTTTCGATT 
GAAGCGAAAG AAGGGGTGAC GACAGGGGTC TCTGCGAAAG ATCGCGTTAC AACGGTCAAA 
ACGGCCACTT ATTTTGATGC TCAACCAGAA GATTTAGCAA GACCAGGCCA TGTTTTTCCA 
CTGGTTGCGA AAACAAATGG CGTGTTGGCC CGTCGAGGTC ATACCGAAGG TACGATCGAT 
TTGATGTATC TAGCAAACTT AGTCCCGTCA GGGATCCTTT GTGAACTGAC TAACCGTGAT 
GGAACCATGG CGAAACTGCC AGAGACCATT GAATTTGCAA GGCGTCATGG AATGCCAGTA 
CTCACTATTG AAGATATCGT CGATTATCGA ACGGGTATCG ACCTGAGAAA TGAATATGAG 
AGTGGCTTAG TGTGTGAAGT GAGTTGGTCT TAG
 
Protein sequence
MSSTSLLDEF GTPVQRVERA IEALKNGLGV LLMDDEDREN EGDLIFSAQH LTEAQMALMI 
RECSGIVCLC LTEERANWLE LPPMVKDNRS KNQTAFTVSI EAKEGVTTGV SAKDRVTTVK 
TATYFDAQPE DLARPGHVFP LVAKTNGVLA RRGHTEGTID LMYLANLVPS GILCELTNRD 
GTMAKLPETI EFARRHGMPV LTIEDIVDYR TGIDLRNEYE SGLVCEVSWS