Gene VIBHAR_06233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06233 
Symbol 
ID5557747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1413408 
End bp1414814 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content48% 
IMG OID640910707 
Productchloride channel protein 
Protein accessionYP_001448352 
Protein GI156977446 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAAC GCGAGAGAAT TGTGAAATCT GTGTTAGCGC ACGTACCGAA AGATGCGATT 
AACCAGTTTG TCTCTCGAGG GTCAACGCCA ACATCATTTT CCGTCCTCTT TATGGCGGCG
ATTGTTGGTA CGCTAGCAGG CCTTGTTGGA ACCTACTTTG AAATTGCCGT TCACTTTGTG
TCAGAAACTC GTACCGAGTG GTTAAAAAGC GAAATCGGTA GCGTACTGCC TTTGTGGCTC
GCTGCAATTT TGATCAGTGG CGCATTAGCG TTCATCGGTT ACTACCTTGT GAACCGTTTT
GCCCCTGAGG CATCAGGCTC TGGTATTCCA GAAATCGAAG GTGCAATGGA TAACATTCGC
TCCGTTCGTT GGTGGCGAGT GATCCCAGTA AAATTCTTTG GCGGTATGGG TGCACTTGGC
TCAGGTATGG TACTAGGTCG CGAAGGTCCA ACAGTACAGA TGGGCGGTGC GGTTGGTCGT
ATGGTTACAG ACATCTTCCG AGTAAAAGAC GATGATACCC GTCACTCTCT ATTGGCATCC
GGTGCCGCCG GTGGCTTAGC GGCAGCATTT AACGCACCGT TGGCAGCCAT CATGTTTGTG
GTTGAGGAGA TGCGCCCTCA GTTTCGTTAC TCTTTGATTT CGATTCGCGC AGTGATCATC
TCAGCCATCA TGGCGAACAT TGTGTTTCGA GCCATCAACG GTCAAGAAGC CGTTATCACC
ATGCCACAAT ACCAATCTCC TGAATTGCAA TCGTTGTGGT TGTTCCTGCT TCTCGGTTCT
TTGTTCGGCG TGTTTGGTGT TGTATTCAAC AAACTGATAA CCATTGCACA AGACAGCTTT
GTTGCATTGC ATAAAAACGA CCGTAAACGC TACCTAATCA CAGGTACCAT TTTAGGCGGC
GTATTTGGTC TGTTGCTGCT TTACGTGCCA CAGCTTACCG GTGGTGGTAT TGGCTTGATC
CCAGATATTA CCAATGGTAA TTACTCGATC TCGATTTTAG TCATGCTGTT CGTTGGTCGC
GTGATTACCA CCCTACTTTG TTTCGGCTCT GGTGCGCCTG GTGGTATTTT TGCACCAATG
CTGGCGCTTG GTACTCTCTT TGGCTACGCA TTCGGTGCCA GTGCAGACAT GCTGTTGCCT
TCACTGACTA TCGAGCCGGG TGTATTCGCA ATTGCAGGCA TGGGGGCGCT ATTTGCAGCA
ACAGTGCGTG CACCGATTAC TGGTATCTTG CTAGTTATCG AGATGACGAA TAACTACTAC
CTAATCTTGC CACTCATTAT TACCAGTTTA GGCGCAGTCA TCGTAGCGCA GTTACTTGGC
GGACAACCGA TTTACAGCCA ATTGTTACAT CGTACGCTTA AAAATGACAA ACTACGTCAA
CAAGACCTAC CAGAAAACCA AGCATAA
 
Protein sequence
MIKRERIVKS VLAHVPKDAI NQFVSRGSTP TSFSVLFMAA IVGTLAGLVG TYFEIAVHFV 
SETRTEWLKS EIGSVLPLWL AAILISGALA FIGYYLVNRF APEASGSGIP EIEGAMDNIR
SVRWWRVIPV KFFGGMGALG SGMVLGREGP TVQMGGAVGR MVTDIFRVKD DDTRHSLLAS
GAAGGLAAAF NAPLAAIMFV VEEMRPQFRY SLISIRAVII SAIMANIVFR AINGQEAVIT
MPQYQSPELQ SLWLFLLLGS LFGVFGVVFN KLITIAQDSF VALHKNDRKR YLITGTILGG
VFGLLLLYVP QLTGGGIGLI PDITNGNYSI SILVMLFVGR VITTLLCFGS GAPGGIFAPM
LALGTLFGYA FGASADMLLP SLTIEPGVFA IAGMGALFAA TVRAPITGIL LVIEMTNNYY
LILPLIITSL GAVIVAQLLG GQPIYSQLLH RTLKNDKLRQ QDLPENQA