Gene VIBHAR_06226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06226 
Symbol 
ID5558437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1407334 
End bp1408872 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content49% 
IMG OID640910700 
Productsugar kinase 
Protein accessionYP_001448345 
Protein GI156977439 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA ATCTCGCCCT CAAGCTCTAT ACCGCAGAGC AAGTCAGAAA CGGAGAAGTG 
ATCGCAGCTC AAATGGCTGG AGTCTCAATG TACAGTTTGA TGCAGCGTGC TGGCATGGCG
GTTTACGAGC AATTTCTCCA CCTTTATCCA AAGGCGCGAA CTGTGCTGGT GGTTTGTGGA
AAAGGGAACA ACGGGGGGGA TGGGTATGTG TTTGCTACTC TTGCAAAACA GGCGCAGCTA
AACGTCCGAG TCTTCCAGTT AGGGGACACC ACAGCATTGA AAGGGGATGC GCTGCGAGCA
TTCGAAGATT GGCAAACGAT CGATGGTGAG AACAGCAGCT GGAGCGATTG GCACACAGCG
CTTTTGGAGG CGGACGTTAT CATTGATGCC ATGCTTGGTA CAGGGCTTTC TGGTGAAGTA
AGGCATGAGT ATCGCCGCTA CATTGATCAA GTTAATCAAA TTCATTGTCC AGTCATCTCC
ATCGATATTC CTTCTGGTTT AAGTGCGGAC ACCGGTGCTG TGCTCGGAGA TGCCATACAA
GCGGATCATA CGGTGACCTT TATTGGTGTG AAGCAAGGCT TATGCACAGG GCAGGCGAGA
GACTACGTTG GTGAGCTGCA TTTTTCTGGC TTGGGTGTAA ACGTTGAGTT TGAGTCGATT
GAAGAAGAAA GTGCGTTGGG CATTGACCAT CGAATCATCA AAAGGCTACT ACCAAAAAGA
AAAGCCACAG CCCACAAAGG GAATAATGGC AAGCTCTTAT GTATAGGTGG TAATCAAGGC
ATGTCTGGCG CCATTCGTTT GTGCGCCTCA GCCGCAGCAA GAACAGGGGC AGGACTTACG
GCTGCTCTGA CACACCCGAG CTCTTTATTG CCACTGCAAG TTGGTGCGCC AGAAGTCATG
AGTCAGGCTA TTACGTTTGA TGAGTTAAAA GAGGTAGATA ACGCACTGAT TAAACGGACA
CGTTGGGCGG ATACCTTAGC TTTCGGTCCT GGTTTCGGTG AGGATGAATG GGCGCATCAG
GCATACCAGC TCTTATCTCA GCAACACAAA CCTAAGGTCG TGGATGCTGA TGGACTCAAT
ATTCTTGCGA TGCTGAGTCA GCGTAACGAC GTAGTGGTTT TACGAGATGA GCAACGCGTT
ATGACACCAC ACCCAGGAGA GGCAGCCCGT TTACTTAATG TCTCAACTAA GGAAATAGAG
CAAGACCGTT TTGCCGCCGC AAGACAACTT CATGAACGTT ATGGTGGTGT TGTTGTTCTT
AAAGGGGCGG GTACGCTTAT CTATGATGGT GTGAGAATGT ACATTTGTCT TGCCGGAAAT
CCGGGAATGG CCAGTGGCGG TATGGGGGAT GTGTTATCCG GTGTGATTGC CGCACTGCTT
GCCAAAGGGT TACCTATTGC TGTTGCTGCA CGTTTGGGAG TGATGCTCCA TAGTCACGCT
GCGGACATTA ATGTTCAACA AAAAGGCGAA ATTGGGTTAT TAGCAAGTGA TGTTATTGAA
TCACTTCGAG ACGCCATTAA CTTAAAAAAC GATGATTGA
 
Protein sequence
MDFNLALKLY TAEQVRNGEV IAAQMAGVSM YSLMQRAGMA VYEQFLHLYP KARTVLVVCG 
KGNNGGDGYV FATLAKQAQL NVRVFQLGDT TALKGDALRA FEDWQTIDGE NSSWSDWHTA
LLEADVIIDA MLGTGLSGEV RHEYRRYIDQ VNQIHCPVIS IDIPSGLSAD TGAVLGDAIQ
ADHTVTFIGV KQGLCTGQAR DYVGELHFSG LGVNVEFESI EEESALGIDH RIIKRLLPKR
KATAHKGNNG KLLCIGGNQG MSGAIRLCAS AAARTGAGLT AALTHPSSLL PLQVGAPEVM
SQAITFDELK EVDNALIKRT RWADTLAFGP GFGEDEWAHQ AYQLLSQQHK PKVVDADGLN
ILAMLSQRND VVVLRDEQRV MTPHPGEAAR LLNVSTKEIE QDRFAAARQL HERYGGVVVL
KGAGTLIYDG VRMYICLAGN PGMASGGMGD VLSGVIAALL AKGLPIAVAA RLGVMLHSHA
ADINVQQKGE IGLLASDVIE SLRDAINLKN DD