Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06226 |
Symbol | |
ID | 5558437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1407334 |
End bp | 1408872 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640910700 |
Product | sugar kinase |
Protein accession | YP_001448345 |
Protein GI | 156977439 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related [TIGR00197] yjeF N-terminal region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATTTTA ATCTCGCCCT CAAGCTCTAT ACCGCAGAGC AAGTCAGAAA CGGAGAAGTG ATCGCAGCTC AAATGGCTGG AGTCTCAATG TACAGTTTGA TGCAGCGTGC TGGCATGGCG GTTTACGAGC AATTTCTCCA CCTTTATCCA AAGGCGCGAA CTGTGCTGGT GGTTTGTGGA AAAGGGAACA ACGGGGGGGA TGGGTATGTG TTTGCTACTC TTGCAAAACA GGCGCAGCTA AACGTCCGAG TCTTCCAGTT AGGGGACACC ACAGCATTGA AAGGGGATGC GCTGCGAGCA TTCGAAGATT GGCAAACGAT CGATGGTGAG AACAGCAGCT GGAGCGATTG GCACACAGCG CTTTTGGAGG CGGACGTTAT CATTGATGCC ATGCTTGGTA CAGGGCTTTC TGGTGAAGTA AGGCATGAGT ATCGCCGCTA CATTGATCAA GTTAATCAAA TTCATTGTCC AGTCATCTCC ATCGATATTC CTTCTGGTTT AAGTGCGGAC ACCGGTGCTG TGCTCGGAGA TGCCATACAA GCGGATCATA CGGTGACCTT TATTGGTGTG AAGCAAGGCT TATGCACAGG GCAGGCGAGA GACTACGTTG GTGAGCTGCA TTTTTCTGGC TTGGGTGTAA ACGTTGAGTT TGAGTCGATT GAAGAAGAAA GTGCGTTGGG CATTGACCAT CGAATCATCA AAAGGCTACT ACCAAAAAGA AAAGCCACAG CCCACAAAGG GAATAATGGC AAGCTCTTAT GTATAGGTGG TAATCAAGGC ATGTCTGGCG CCATTCGTTT GTGCGCCTCA GCCGCAGCAA GAACAGGGGC AGGACTTACG GCTGCTCTGA CACACCCGAG CTCTTTATTG CCACTGCAAG TTGGTGCGCC AGAAGTCATG AGTCAGGCTA TTACGTTTGA TGAGTTAAAA GAGGTAGATA ACGCACTGAT TAAACGGACA CGTTGGGCGG ATACCTTAGC TTTCGGTCCT GGTTTCGGTG AGGATGAATG GGCGCATCAG GCATACCAGC TCTTATCTCA GCAACACAAA CCTAAGGTCG TGGATGCTGA TGGACTCAAT ATTCTTGCGA TGCTGAGTCA GCGTAACGAC GTAGTGGTTT TACGAGATGA GCAACGCGTT ATGACACCAC ACCCAGGAGA GGCAGCCCGT TTACTTAATG TCTCAACTAA GGAAATAGAG CAAGACCGTT TTGCCGCCGC AAGACAACTT CATGAACGTT ATGGTGGTGT TGTTGTTCTT AAAGGGGCGG GTACGCTTAT CTATGATGGT GTGAGAATGT ACATTTGTCT TGCCGGAAAT CCGGGAATGG CCAGTGGCGG TATGGGGGAT GTGTTATCCG GTGTGATTGC CGCACTGCTT GCCAAAGGGT TACCTATTGC TGTTGCTGCA CGTTTGGGAG TGATGCTCCA TAGTCACGCT GCGGACATTA ATGTTCAACA AAAAGGCGAA ATTGGGTTAT TAGCAAGTGA TGTTATTGAA TCACTTCGAG ACGCCATTAA CTTAAAAAAC GATGATTGA
|
Protein sequence | MDFNLALKLY TAEQVRNGEV IAAQMAGVSM YSLMQRAGMA VYEQFLHLYP KARTVLVVCG KGNNGGDGYV FATLAKQAQL NVRVFQLGDT TALKGDALRA FEDWQTIDGE NSSWSDWHTA LLEADVIIDA MLGTGLSGEV RHEYRRYIDQ VNQIHCPVIS IDIPSGLSAD TGAVLGDAIQ ADHTVTFIGV KQGLCTGQAR DYVGELHFSG LGVNVEFESI EEESALGIDH RIIKRLLPKR KATAHKGNNG KLLCIGGNQG MSGAIRLCAS AAARTGAGLT AALTHPSSLL PLQVGAPEVM SQAITFDELK EVDNALIKRT RWADTLAFGP GFGEDEWAHQ AYQLLSQQHK PKVVDADGLN ILAMLSQRND VVVLRDEQRV MTPHPGEAAR LLNVSTKEIE QDRFAAARQL HERYGGVVVL KGAGTLIYDG VRMYICLAGN PGMASGGMGD VLSGVIAALL AKGLPIAVAA RLGVMLHSHA ADINVQQKGE IGLLASDVIE SLRDAINLKN DD
|
| |