| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06209 |
|---|
| Symbol | |
|---|
| ID | 5558089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | + |
|---|
| Start bp | 1388337 |
|---|
| End bp | 1393094 |
|---|
| Gene Length | 4758 bp |
|---|
| Protein Length | 1585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640910683 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001448328 |
|---|
| Protein GI | 156977422 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTTCC AATTTGACCA AGAAGTGTAT TTATTTGGTG CTTACTTCGA AAGAAAAGAG
ACGGACGAAG GAAATTTCTT CCCAAATTGG CACCAAGAAT CCGACTTAAC CGAGAAAACA
GAACTAGACG GTAAAATCCG CCCTATTCCT CAGACGCCGA TCATGGTGAA CGCGATAGCG
GGTATGGATT CTCAGCTTTG GGGCACCACT TTAGAAGGAA AAATCGTCGA GTTAGGCATG
GGAGAGCCTT TATCGAAATC TGCAGCGCAG CCGCTTAATG GCGAAAAGGT TGATGGGGAA
GAGACTGTAA CTGAAGATAA AGAAAACTTC ATGATTTTGC ATCCAGGTGC GCGCAAAGAG
GATATCCAAA AGGACATCGA TTATGAGTTG AGCTTCCCGC CAATTAGCTG GCTGTCACAG
ATGATCGCCC CGCCGGATTA CAAAGACGGA GGCGCATCTG ATGTCGCGAC ATTAGCAGAG
AACATCAAAC ATTTTGCGAC GACCATCGAC GGAGTTGTTG ATGGTAAGCG TCAAACTGGG
GTTAAGTTTA AGCTTACCAA AATCAAACCG TCTCAATTGG CAGCAAAATA TGAAGAGGAA
ACGGATGGCA AGCTGAGTGA AGAGCAGAAA GCCTATAACA GTTGGTATGA CAAACAACAA
AAGAAACCAT ACCTACAAGG CTTTATCGTC CCTCGCGTGC ATACCTGTGC GGTGCTATTT
ACTGACCCAT TTTATGCTGG CGCAGAGGTC ACACTGGTAC AGCCCTTAAA ACAGATCAAA
CCTGGAGAGT CTGAGAGTGC CGGTGAAACG ATTATCGCAA CACAAACGGT CATACAAAGA
AAGCCAAGGT GGGACGACAG GATTGAAAAC AATGTCTTAC CCAGCGCACT TTTACACCTG
GACCCCATTG ATGCCAAGGA CGGGTTCTAT CTCATTCGGG TCGCCTTTCG CGAGCAAGAA
TGGCTGGAGT TTGAAAAAGA ACTGTATCAG CGGCTGAAGT TGCCGGAGAG CGTCATTAGA
GCCAATGTAA AAAAATCCAA AGCGTTCATC GGCAACACGG ATGAAGTTCA AGACGTCTAT
ACCTATGAGC TGCATGAGCG GTTAATTTTT AAAGAGACGG CAGGCATTGG CAAAATGGCG
TGTGTGTGTG GTGATATGAT CACCCTTGAA GAGACGCTGA TACAACAATT TCCCAGCCAG
TTACCCGAGT ACAGTGTTTA CGCTAGCAAG GGCGTCACGT ATCACAACCA GTCTAAACCT
GGACTGGCCT CGTTATCACT GAGCTCGGCC ATCATGAAAA CCTACGATTC ATTGAGCTCG
GATTTTCTCT CTATCGAGGG TGCCAAAGTG TACGGCACCT TTGGTGATAT GGCCAAAACC
ATTGGTCAGG CATTATGGGA AAATGCCGAA GCGGGTAACC TGCCCGACTT CATTATGAGC
GGGTTGTCTT TGAAGGCGGC GTTCGCGGCA TGTAAAGATG CTCAACAGAC GATTGATATT
TCTAAAACTC TTGTGGCGCT ACCATTAAGC GTAAAAGATT ATAGAAAACT GATCCTGAAA
AAAACCGTCA TCAACATTCC ATATATAAAA CAAGCATTCA AAGATAACGG TCAAACCAAA
ATATTCCGAG GTTTAGGCCG CTTATCCAAA GATTTTCTGT CTGGCACCAA TCAAGCTTTG
CCTGTGATAC AACTCGGGTT AAGCGCGATG GAGACCAAAG AGCAGTATGA TAAACACATT
GATGCACTCG AAGATGCCGA CCAAGCCCAC GGAAGCCTCA AAGCGTATGC CCAACAGTAC
CTTTCTGCGA TTGCTTATTT GCGACGCTCT GATGAGAAGG AACGATGGGA GACAAAAGCC
ACCGAGGTAC AGGGTTTTCT GGGAAATGAA GCAAAAATCT ACACCGATGC CATGGGCGTC
GTGGTGCGGA TCAACTTCAA ATTTAACTCC GCTGAGTTTG AGAACGAGGT AAAAGCACTC
AATAGTAATT ATGAGGAGCT TTGTAAAAAA CTACGTAACC TACTGGTCGA GAACCCTGAT
TATCAGATCG CATTAATTGG CCATGGTGGC CCTATCAGTA GTCAGGAGAA AAACCTGATC
GTCTCACAAA GACGAATCGA TACAATCAAA GATCGGATTT TAAATGGGAC TCAAGGTGAC
GAAAGAATAA AGCTTGAACG TAGACTCGTC ACACAAGCCA AAGGTAAAGC TGAATTATTA
CCTAAGGAAG GCGGTTACCA CGACCATGGT GACCGTTCGG ATACAGCCGA CATTGCTATA
AACCGAAGAG TGGAAGTTCG CTTGGTTATC CCTGATTTCT CAATTTCTCT GCCGCCGAGT
CGAACAGGTA CCCTCGCCTT AAACCGGGCT CACCAATATT GGGAAGGGTT TAAAATTACC
GCAAAAGAGG CTCAAAAAGA GGCCTTCTTC TCTGCGATTG ATGTGCTTGC TACCGTCGCG
CTTTGGACCC CAGCTTCCCC TATCGCCGCA TATTATTTAG CAGGTAGCAC AGCCGGCAAA
TTGCTTGGCG CTGCTACGGA TTTTTATGGC GACTTGTTTG GTGATCAGAC GTTTAAAAAA
TTAAAAGATA CTTACAACAC AAAAAGCATG CTCAAGACCC TTAGCATGAT TAACCAAGAG
TTGATCGTGT TGTACGAGGA AGTGGATACA AAACTTGAAC AGAAAGAGTT AAAGCCAAGC
GAGATAGCCG GTTTTCTCGA GAGCCAGGTT AATCACGACG AGCTACTTAA ACGCTTTTTA
CTGCGAGCCT ACGCTCTGAA CTCATTGGTC GAGCTGTTAG CCATTTTAAG TAGCATGGAT
GGTGTGCTCC GTAGCTTTGA TAATCTGATA GAACAGTACG AAGTGGACTT GTTCATCGAG
CAATACGTGA TGAGCGACAA TTGGTCCATT CCTGTCAATA TGGGCAATAC GCTCGCTTTA
AACTGGATTA ATCGCAAAAA GGCGTTTAAC TCTTCATTGT CCCATACGGT AAGCAGTTTG
GCCTTTGATC AAGGTCGTCA GGTGCATGGC TCCTTTAACA CTGGTTTCCC AGTACAAAGT
CAGTTGTATT TAAACGACAA GACAGCGGAC ATGATCGATA TCAATCTAGC CAAAAAAGAA
GGCTTAAAAG CGTTTTGCAA CGACTTTAAT CTAACCAAGG TCGAACTCGA GGAGAAAGAC
ATTGGCTTTA GCCGCTTATT GGTTAAAGAA GGGAACAACT GGCAACCTTA CGTAGATTGG
GTGAGAGAGG AAAGCGGACG CAAACTCAGA CCGCAAACCC GCGTTATGCT GCAAGTGATC
TTAACAGGAG AAGGCGAGCA TCACTCTAAG AGTATGTTCT TACGAGAGGT GTCGTACAGC
ACCGAAGTCA TCGGATTTAA CACCAATTGC CCTGCATTTG ATGTGTTGTT TACTAAAAAG
AACGCGCAAG AATTACAAGA TCCTGACGGC GCAGTAGCAA AGTACTTTGA ACAGCAGCCA
CAATTACAGG AAGAAGAACT CGAGCTGCAT TCCCTTGAGT TTGAACCGAC CTATACATTC
GGCCATGTAT ACATCCATGG TTTAAAACCG CTCTGCCCTT ATGTGAAAGG CATCGACTCG
CTGAAAGCAC TTATCAAAGG CCAATCAGTA TTTGAGCATG TGCTCGACAA TGATGGTTTT
GACCAAATGG AATATACCTT CAGCCTCGCG AAACACGATT TAGCACTTGG CGTACGGATG
GTCGGTACCA ATAACCAATT TAGACTTGAA TACCTCACCG CGAAATACGG GACATCGAAA
GCTTCAAGCC CTCAGAAAAG TCACTTTGAT GGCCAAATAG AAGTGCTGAG CCAGTTTGAA
GATACAGACT TCTTAATCGA AGATTTTGTA ATGAGTGAGT CGTCGTCAGC CCGCGATAAC
ACACCACAAG TTATCGGCGA TCAACTAACA GTACTGCAAG GGATTGAAAT TGATGGTCAA
CTAAAGTGGG GAGAAGATTG GACAGAGCAA GCATTAGCCA GTGAGTTTGA TTGGAACAAA
GAAACCTCGT TTGCCGTCTG TTTTGCCCTA TTCGGCGATG AGCTAGCAAG CCAAGAGTAC
GAGACTATGC GACTGAATTG GCGTGAACTG ATGATGAAAT TGAAGTTAAA AGACGGACCA
ACCATACACA GCGCAATGCA TTATTGTGGG GAAATGAGTA TCGCAACACA TACGACCGTC
GTCCCATCAA ACAATAATTA CAACGGTATG CAAAACGAGA TAGTCTTTAA ACTAGCGCAT
GACAAAACAC AAAGTACGCA CAACCATGAT GACCTTGCAC AAAGCGCCAT TGACTTTTTA
CAAGACAATA CTGCGCAGTA CAGCCAGTCA TTGAAAAGCA GTGACCGCAA GCATGTGTAT
ATCGTGCGTT TCAAGTTTAC TTACGTTTCC CCTACGGGAA CCTTGGTAGA TGGCATGCGC
CCATATGGAG ACATTATCGC GGGTAAAAAC CTTAAACCTT TGACAGTAAC ATTTGAATCA
TTACAGCAAT CAGCGCTTAA TGAAGGGTAT CCGCTACCTG GTATCGATGT GAGGCTGCCA
CCTATCAAGG ACTACATGGA TAAACCATGG ACGCGTATCC TCAATGAAAA AGAGCCATCG
AGTATTTCGG TAAGAAATCA CTGGGGGAAC TTAGAAAGCC CAGAACAAAA ACGAGAGTTC
GTTAATAAAT GGATAACAGA GCAAGGGCTC TCGCTCAAAG CCCCTCAAGT TGAACTGCTC
CAAATCAAAG AGATTTGA
|
|---|
| Protein sequence | MGFQFDQEVY LFGAYFERKE TDEGNFFPNW HQESDLTEKT ELDGKIRPIP QTPIMVNAIA
GMDSQLWGTT LEGKIVELGM GEPLSKSAAQ PLNGEKVDGE ETVTEDKENF MILHPGARKE
DIQKDIDYEL SFPPISWLSQ MIAPPDYKDG GASDVATLAE NIKHFATTID GVVDGKRQTG
VKFKLTKIKP SQLAAKYEEE TDGKLSEEQK AYNSWYDKQQ KKPYLQGFIV PRVHTCAVLF
TDPFYAGAEV TLVQPLKQIK PGESESAGET IIATQTVIQR KPRWDDRIEN NVLPSALLHL
DPIDAKDGFY LIRVAFREQE WLEFEKELYQ RLKLPESVIR ANVKKSKAFI GNTDEVQDVY
TYELHERLIF KETAGIGKMA CVCGDMITLE ETLIQQFPSQ LPEYSVYASK GVTYHNQSKP
GLASLSLSSA IMKTYDSLSS DFLSIEGAKV YGTFGDMAKT IGQALWENAE AGNLPDFIMS
GLSLKAAFAA CKDAQQTIDI SKTLVALPLS VKDYRKLILK KTVINIPYIK QAFKDNGQTK
IFRGLGRLSK DFLSGTNQAL PVIQLGLSAM ETKEQYDKHI DALEDADQAH GSLKAYAQQY
LSAIAYLRRS DEKERWETKA TEVQGFLGNE AKIYTDAMGV VVRINFKFNS AEFENEVKAL
NSNYEELCKK LRNLLVENPD YQIALIGHGG PISSQEKNLI VSQRRIDTIK DRILNGTQGD
ERIKLERRLV TQAKGKAELL PKEGGYHDHG DRSDTADIAI NRRVEVRLVI PDFSISLPPS
RTGTLALNRA HQYWEGFKIT AKEAQKEAFF SAIDVLATVA LWTPASPIAA YYLAGSTAGK
LLGAATDFYG DLFGDQTFKK LKDTYNTKSM LKTLSMINQE LIVLYEEVDT KLEQKELKPS
EIAGFLESQV NHDELLKRFL LRAYALNSLV ELLAILSSMD GVLRSFDNLI EQYEVDLFIE
QYVMSDNWSI PVNMGNTLAL NWINRKKAFN SSLSHTVSSL AFDQGRQVHG SFNTGFPVQS
QLYLNDKTAD MIDINLAKKE GLKAFCNDFN LTKVELEEKD IGFSRLLVKE GNNWQPYVDW
VREESGRKLR PQTRVMLQVI LTGEGEHHSK SMFLREVSYS TEVIGFNTNC PAFDVLFTKK
NAQELQDPDG AVAKYFEQQP QLQEEELELH SLEFEPTYTF GHVYIHGLKP LCPYVKGIDS
LKALIKGQSV FEHVLDNDGF DQMEYTFSLA KHDLALGVRM VGTNNQFRLE YLTAKYGTSK
ASSPQKSHFD GQIEVLSQFE DTDFLIEDFV MSESSSARDN TPQVIGDQLT VLQGIEIDGQ
LKWGEDWTEQ ALASEFDWNK ETSFAVCFAL FGDELASQEY ETMRLNWREL MMKLKLKDGP
TIHSAMHYCG EMSIATHTTV VPSNNNYNGM QNEIVFKLAH DKTQSTHNHD DLAQSAIDFL
QDNTAQYSQS LKSSDRKHVY IVRFKFTYVS PTGTLVDGMR PYGDIIAGKN LKPLTVTFES
LQQSALNEGY PLPGIDVRLP PIKDYMDKPW TRILNEKEPS SISVRNHWGN LESPEQKREF
VNKWITEQGL SLKAPQVELL QIKEI
|
|---|
| |