| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_06196 |
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| Symbol | |
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| ID | 5558403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 1375323 |
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| End bp | 1376693 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640910670 |
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| Product | Flp pilus assembly protein, secretin CapC |
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| Protein accession | YP_001448315 |
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| Protein GI | 156977409 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAATAC AATCTCGAAT TAGCCGATCA CTTTCAATAT TCATCACGTC CGTCTTTCTT
TGCTTGTTCT TTGTGACAAA AACACACGCA GCTGATCGTT CAATCACTCT ACATGATGGA
CAGCATATTT CGCTTAAACA GCCGATTGGC AAAGTGTTCA TCAGCAATCC TGATGTTGCT
GACTATAAAG TCATTAACGA CACAACCTTG GTCGTGTTTG CTAACGGTAT CGGGCAAGCA
CGCTTGATTG TCTATGGCAT CGATGAAGAT GTCTTGCTTT CAGACCGAAT TATTGTGGAC
TTGGATTTGA CTGATGTTAG ACGTCAGATC AAATTTAATT TTCCGGATGC GAAGGTCACG
GTTCAGTCAA TTGGGGAACA AGTCGCTGTC AGTGGTTTTG TCGATTCAGA AGAGACACGA
GACGAAATCT ATCGTTTAGT TGCAACCTTA CTTGGGCGTG AAAAAATTAA GAAATGGGAT
AAAGCGGATA AGTTTGAGTT TAAATCTGAT TACGCCCAGT ACGAGGCTCC GGAAGGGATG
ATTTTTGCGC GTAACATGTC TTGGAGAGGA ATTGTCGAGC GCATTGAGGT TGCAACGACT
CAACAAGTAA ACGTTAAAAT CTCGGTGGCA CAAGTGACAG AATCCTTTGG TAAAACTGTT
GGTGTAGACT GGAGTTCTGT CGGCTCTAGC GTTGGTGAGT TCGTTTTCGA TCAGTTTGAT
GCCGCGAATC TAAGTACGCT AATTACCGCT TTAGGCAATG ATCAAGTTGC TGAAGTATTG
GCAGAACCAA ACCTGACGGT GCTATCTGGT GAATCGGCTA GTTTTTTAGT TGGTGGTGAA
GTACCAGTGA TTATCTCAAC GAATAATAAC GTAAACATTT CCTTCAAAGA GTTTGGTATA
AAGCTGGATC TTACAGCAAA AGTTTTAAGC AAAGACAAAA TTCGCATGCA ACTCGCACCG
GAAGTGAGTG AGGTCGAAAG CTACGTAGAA GCAGCAGGTA TAAAAGTGCC GCAATTGGCT
TCAAGGCGAG CGTTAACAAC GGTTGAGTTA GCTGATGGCG ACAGCTTTAT TCTAGGTGGC
TTGATGAGCA GTGCTGACCT AGAAAAAATG CAAAAAATTC CCTTTGTCGG CGATATCCCA
ATATTAGGTG CTGCGTTTCG CAAAGCTATG ACTGAGAGAA AGCGCACGGA ATTGATTATC
GTGGCAACGG TAAACCTAGT TGAGCCTATT AAGCCGAAAG ATGTGCAATT ACCGTACATC
AAGAAAACGT CAACATTGGC TCGTTGGTTG AACATCGAGT CCAATAAAGA TTCTATTGCG
TCGTCTGATG CCACGATTCG TCTGTTGTCG GAAGGAGGGT TTATCCAATG A
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| Protein sequence | MVIQSRISRS LSIFITSVFL CLFFVTKTHA ADRSITLHDG QHISLKQPIG KVFISNPDVA
DYKVINDTTL VVFANGIGQA RLIVYGIDED VLLSDRIIVD LDLTDVRRQI KFNFPDAKVT
VQSIGEQVAV SGFVDSEETR DEIYRLVATL LGREKIKKWD KADKFEFKSD YAQYEAPEGM
IFARNMSWRG IVERIEVATT QQVNVKISVA QVTESFGKTV GVDWSSVGSS VGEFVFDQFD
AANLSTLITA LGNDQVAEVL AEPNLTVLSG ESASFLVGGE VPVIISTNNN VNISFKEFGI
KLDLTAKVLS KDKIRMQLAP EVSEVESYVE AAGIKVPQLA SRRALTTVEL ADGDSFILGG
LMSSADLEKM QKIPFVGDIP ILGAAFRKAM TERKRTELII VATVNLVEPI KPKDVQLPYI
KKTSTLARWL NIESNKDSIA SSDATIRLLS EGGFIQ
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