Gene VIBHAR_06186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06186 
Symbol 
ID5558178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1366618 
End bp1367268 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content46% 
IMG OID640910660 
Producthypothetical protein 
Protein accessionYP_001448305 
Protein GI156977399 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGT TAGTCATTGG TGCAGTCGCT CTATCAACGC TGCCATTTAG CGTTGCCATT 
AAGGCGGAGG AAGGACTTAG CGTCTATTGC GACAACACAT TCAGCGAGTA TCAACATAGT 
GTGAGTGTGG ATGATGCCGT TGGGATTGCT CAACATCGAC AGGGCTTTCT ACAGATCGAA 
CAACAGTCCG AAAGTAGCAA ACTCAGACAG CGTCTAGCGG AGGTGTCGAA GCTAGGTTTG 
GATAAGTCTG GGTGTATGAC TTGGATCAGT AACCAAAATA ACCATCAACA AAGCGATGGC 
TTGGTTGCGC GTCTGCATTT TGGTTTTGAT CAATCCAGCC TAACTCCTAT GGGCAATAAA 
GCGTTAACCC AATTAGCGTC GTCTTTAAGT GAAGGTGATA GCCCAATTAC AGTAGAAGGC 
CATACTGACA GCAAAGGTTC TGAAGGTTAC AACCAAGAAC TGGGGCTGCA AAGAGCCTTA 
ACGACGTCCA AAGTTTTGAG TACTGATGGC GTGGAGAGAA CTCGTATTGT CGTTCGTTCA 
TTAGGTGAAA CCCAGCCTAT CGCATCTAAT TCAACGGTAG AGGGAAGAGC GCAAAACAGA 
CGATCAGAAG TATGGGTTTC AAAAAACGAC TCAGTGAAAA CTGAAGATTA G
 
Protein sequence
MKKLVIGAVA LSTLPFSVAI KAEEGLSVYC DNTFSEYQHS VSVDDAVGIA QHRQGFLQIE 
QQSESSKLRQ RLAEVSKLGL DKSGCMTWIS NQNNHQQSDG LVARLHFGFD QSSLTPMGNK 
ALTQLASSLS EGDSPITVEG HTDSKGSEGY NQELGLQRAL TTSKVLSTDG VERTRIVVRS 
LGETQPIASN STVEGRAQNR RSEVWVSKND SVKTED