Gene VIBHAR_06170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06170 
Symbol 
ID5558170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1348404 
End bp1349546 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content46% 
IMG OID640910644 
Productsensory transduction protein kinase 
Protein accessionYP_001448289 
Protein GI156977383 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTT TGATTGTAGA AGATGATCGA TTACAAGCAA CCAATCTTAA GATTTTGCTC 
AATCGTCTAT TTGAAGGCAC GATTACCGTC GTCCATCGAG GGTCAGAAGT CGCGACCGTT
TGCGAGGCCC AACCAATCGA TGTGATGTTC TGCGATATTG ATTTACCAGA TATCAATGGG
GTGAACCTAC TTTCAACCCT TGCAGAAAGC TCGCGTCCAA AAGGCGTGGT GATTTTGAGT
GCGATGACCC AAGACGTGCT CGAAATTACC TACAACATGT GCTTGTCTGC GGGCTACGGG
TTTGTTCGCG CATTAACTAA ACCCATTTCT AATCAGCAAC TCACTCAGAT CTTCGGTGAG
TTCAAACAAT ACTTATCGCA AGAGCAATTC GTGAGCTTGC CTGTGTTAAT GAATGACGAC
GAGATTGACA CTGCCTTCAA TGAGGGCAGG TTTATCAATT ATTACCAACC ACAATACTCA
ACGTCGGATA ACCAACTGAT TGGAGTCGAA GCATTAGTAC GTTGTCGTCA CCCCGAGCAC
GGCATTATTG CACCTGCGCA GTTTATTACT GAGATTCAGG TTCGTAACGA GTTGGATAAA
CTGTTCTGGA TTGTGCTAGA GAACGCGCTT CAAGACATGT CCGCACTGAA AGTAGACATC
AACTTATCAG TCAACATGAA CCAAAAGACG CTGAAGCAAC CTATGAGTGA GCGACTATTT
GCCTTGTGCG AACAATACCA AATAGCACCT GAACGCATCA CACTTGAACT GACCGAAGAC
GAAGTGTACG ACTGCAGCGT CACGTCGCTA GCCAACCTCG CCAACTTACG TTTAAGAGGC
GTTGGCTTAG CCATTGACGA CTTTGGGACC GGTTACTCGT CCCTGAGCCA GTTAGCAACG
CTGCCTTATA CAGAGTTAAA GATTGACCGC CAATTTATCA AAGATGCATT AACCAACTTC
AAGAGCCAAC AGCTCACTAT TTCGAGCCTA CACCTAGCAA AGTCATTAGG ACTTAAATCG
GTGGCAGAAG GTGTAGAAGA TAATGAAACA TTGGCGTATT TGCGCGAACT TGGCGTGGAA
CTTTACCAAG GATTTGTTCG CTGCCGCCCT ATCCCCTTTG AACAATTGGA AACGTTGATC
TAA
 
Protein sequence
MNVLIVEDDR LQATNLKILL NRLFEGTITV VHRGSEVATV CEAQPIDVMF CDIDLPDING 
VNLLSTLAES SRPKGVVILS AMTQDVLEIT YNMCLSAGYG FVRALTKPIS NQQLTQIFGE
FKQYLSQEQF VSLPVLMNDD EIDTAFNEGR FINYYQPQYS TSDNQLIGVE ALVRCRHPEH
GIIAPAQFIT EIQVRNELDK LFWIVLENAL QDMSALKVDI NLSVNMNQKT LKQPMSERLF
ALCEQYQIAP ERITLELTED EVYDCSVTSL ANLANLRLRG VGLAIDDFGT GYSSLSQLAT
LPYTELKIDR QFIKDALTNF KSQQLTISSL HLAKSLGLKS VAEGVEDNET LAYLRELGVE
LYQGFVRCRP IPFEQLETLI