Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06161 |
Symbol | |
ID | 5557439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1336407 |
End bp | 1337222 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640910635 |
Product | C-5 sterol desaturase |
Protein accession | YP_001448280 |
Protein GI | 156977374 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATGGT CACAGATTAC AGAGCATCCT GATTTATTGT TGATGTTGCT CGCGCCAATA TTCTTTCTTT GTATTGCGGC AGAATATTGG TTTGGACAGC GGGGTGGTCG ATTGCCTGAG AGTGCGCGAT ATTACTTGCC AGAAGTCGTG TGTAACTTTG TATTGGCTGG GCTTCATCAA GCGACAGATA TCTTAACAGG GCTGTTGATC GCTAAACTGT ATTTGTGGTG GTTTGGTTGG CGCTTGTTTG ATATCGAGAT GACGGTTTCA ACCTTCCTGT TACTCATGGT ATTGCAAGAT TTCTTCTATT ATTGGTTCCA CCGAGCAAGC CACCGTATCC GTTGGATGTG GGCAGCGCAT GTGGTGCACC ACAGTTCAGA GCGTATGAAC TTCAGTACCG CATTTCGCCA AAGCCTGATG TACCCACTAG CGGGTATGTG GTTATTCTGG TTGCCACTGG TCATTATTGG ATTTGATCCT AGATGGGTGG TGTTTGTTGT GCTGCTCAAC CTTGGTCTGC AATTCTTTGT TCATACTCAG TCGATTCGTT CCCTTGGACC TTTGGAGTGG GTCTTCAATA CACCATCCCA CCACCGCGTG CATCATGGCG TGAATCATCA ATACATTGAT AAAAATTACG CTGGCGTGCT GATCATCTGG GATCGCATGT TTGGAACATT CGAGCCAGAA GTAGAAACCG TCCGTTATGA CATCTCAAAG CCCGTTAACA GCTTTAATCC TATTACCGTG ACGTTCGCGG AATGGAAAGA TATGTTCAAA GAGGTGACTC GTCCCAATTT GTCTTGGCGT CAATGA
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Protein sequence | MEWSQITEHP DLLLMLLAPI FFLCIAAEYW FGQRGGRLPE SARYYLPEVV CNFVLAGLHQ ATDILTGLLI AKLYLWWFGW RLFDIEMTVS TFLLLMVLQD FFYYWFHRAS HRIRWMWAAH VVHHSSERMN FSTAFRQSLM YPLAGMWLFW LPLVIIGFDP RWVVFVVLLN LGLQFFVHTQ SIRSLGPLEW VFNTPSHHRV HHGVNHQYID KNYAGVLIIW DRMFGTFEPE VETVRYDISK PVNSFNPITV TFAEWKDMFK EVTRPNLSWR Q
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