Gene VIBHAR_06161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06161 
Symbol 
ID5557439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1336407 
End bp1337222 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content46% 
IMG OID640910635 
ProductC-5 sterol desaturase 
Protein accessionYP_001448280 
Protein GI156977374 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATGGT CACAGATTAC AGAGCATCCT GATTTATTGT TGATGTTGCT CGCGCCAATA 
TTCTTTCTTT GTATTGCGGC AGAATATTGG TTTGGACAGC GGGGTGGTCG ATTGCCTGAG
AGTGCGCGAT ATTACTTGCC AGAAGTCGTG TGTAACTTTG TATTGGCTGG GCTTCATCAA
GCGACAGATA TCTTAACAGG GCTGTTGATC GCTAAACTGT ATTTGTGGTG GTTTGGTTGG
CGCTTGTTTG ATATCGAGAT GACGGTTTCA ACCTTCCTGT TACTCATGGT ATTGCAAGAT
TTCTTCTATT ATTGGTTCCA CCGAGCAAGC CACCGTATCC GTTGGATGTG GGCAGCGCAT
GTGGTGCACC ACAGTTCAGA GCGTATGAAC TTCAGTACCG CATTTCGCCA AAGCCTGATG
TACCCACTAG CGGGTATGTG GTTATTCTGG TTGCCACTGG TCATTATTGG ATTTGATCCT
AGATGGGTGG TGTTTGTTGT GCTGCTCAAC CTTGGTCTGC AATTCTTTGT TCATACTCAG
TCGATTCGTT CCCTTGGACC TTTGGAGTGG GTCTTCAATA CACCATCCCA CCACCGCGTG
CATCATGGCG TGAATCATCA ATACATTGAT AAAAATTACG CTGGCGTGCT GATCATCTGG
GATCGCATGT TTGGAACATT CGAGCCAGAA GTAGAAACCG TCCGTTATGA CATCTCAAAG
CCCGTTAACA GCTTTAATCC TATTACCGTG ACGTTCGCGG AATGGAAAGA TATGTTCAAA
GAGGTGACTC GTCCCAATTT GTCTTGGCGT CAATGA
 
Protein sequence
MEWSQITEHP DLLLMLLAPI FFLCIAAEYW FGQRGGRLPE SARYYLPEVV CNFVLAGLHQ 
ATDILTGLLI AKLYLWWFGW RLFDIEMTVS TFLLLMVLQD FFYYWFHRAS HRIRWMWAAH
VVHHSSERMN FSTAFRQSLM YPLAGMWLFW LPLVIIGFDP RWVVFVVLLN LGLQFFVHTQ
SIRSLGPLEW VFNTPSHHRV HHGVNHQYID KNYAGVLIIW DRMFGTFEPE VETVRYDISK
PVNSFNPITV TFAEWKDMFK EVTRPNLSWR Q