Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06146 |
Symbol | |
ID | 5556619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1324838 |
End bp | 1325257 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640910620 |
Product | D-ribose pyranase |
Protein accession | YP_001448266 |
Protein GI | 156977360 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA GTACCTTAAT TAACTCTGAA GTTTCTCGCT TGATAGCAAC GCTAGGCCAT ACCGATGAAA TCACCATTTG TGACGCGGGT TTGCCGATTC CTGACCATGT TCAACGCATC GATTTAGCGC TGGCTCATGG TATCCCTGGT TTCCTTGATA CCGTTCGCGT GATTCTGTCT GAGTCCCAAA TTGAAGGAGT CATCATTGCT GAAGAATTCG CAACAGTTAG CCCAGTTCAT CATGATGCGT TAATTACTGA GCTAGCCCAA GAGAGCGGGC TAACTGGTAA GCCAATCGCG ATTAACTATG TATCGCACGA AGATTTCAAA GTTCGAACAT CACAAAGCCG CGCTGTCGTT AGAACAGGCG AGTGTACACC GTATGCGAAC GTAATTTTGC AAGCTGGCGT GGTGTTTTAA
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Protein sequence | MKKSTLINSE VSRLIATLGH TDEITICDAG LPIPDHVQRI DLALAHGIPG FLDTVRVILS ESQIEGVIIA EEFATVSPVH HDALITELAQ ESGLTGKPIA INYVSHEDFK VRTSQSRAVV RTGECTPYAN VILQAGVVF
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