Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06145 |
Symbol | |
ID | 5556618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1323308 |
End bp | 1324813 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640910619 |
Product | D-ribose transporter ATP binding protein |
Protein accession | YP_001448265 |
Protein GI | 156977359 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAAG CCATTCTACA ACTCAGCGAG ATTGAGAAAG CTTTCCCAGG CGTTAAGGCG TTGGATAAAG CCAGTCTTAA TGTTTACCCA GGCCGCGTGA TGGCGTTGAT GGGCGAGAAC GGGGCTGGTA AGTCGACCTT GATGAAAGTG CTTACGGGCA TCTACCACAT GGATGCAGGA AGCATTAAAT ATCAAGGGCA GCCAGCGGCG TTTAAAGGTC CGCGTGACTC TCAAGAAGCC GGCATCAGTA TCATTCACCA AGAATTGAAC TTGATCCCGG AGCTAACGAT TGCCGAAAAC ATCTATCTGG GACGTGAATT TACCGGCTCG ATGGGTCGTA TTCAGTGGGG CAAGATGTAC GAAGAAGCAG ACAAGTTGCT TCAACGCCTT AACGTGAAGC ACTCATCGAA AACATTGCTT GGTGATTTGA GCCTTGGTGA ACAGCAAATG GTGGAGATTG CCAAAGCGCT GTCTTTCGAA TCCAAAGTCA TCATCATGGA TGAGCCAACC GATGCACTAA CCGACAAAGA GACGGAATCG CTGTTTAAAG TGATCAACGA GCTTCGCGGC CAAGGTTGCG GCATCGTCTA TATCTCACAC CGCCTGAAAG AAATCTTCGA AATCTGTGAT GACATTACTG TGCTACGTGA TGGTAAGTTC ATCGGCGAGT GCGAGGTTAA AGACACCAAC GAAGACGGAC TTATCGAGAT GATGGTAGGT CGCAAGTTGG AAGAGCAATA CCCGCGTATC GATGTGAAAC ACGGCGATGT TTGCCTCGAA GTGATTGGCT TGACTGGTTC TGGTGTTCAC GACATCAACT TCACCCTTCA ACGCGGAGAA ATCCTTGGCG TATCAGGTTT GATGGGCGCA GGTCGTACAG AGTTGATGAA GGTGATTTAC GGCGCGCTAC CAAGTGAGCG TGGCGTCATC AACTTAGACA ACAAGACCAT TAATCCGGTT AGCCCACAAG ATGGCTTGGC GAATGGCATT GCTTACATAT CTGAAGACCG CAAAGGCGAT GGCCTGGTGC TGGGGTTATC CGTGAAGGAA AACATGTCTT TGTGCGCGTT GGATAAGCTC ACCAAAGGTT TTCAAATTCA ACACGGTGAA GAAGTTGTGG CGGTTGAAGA CTTTATCAAA CTGTTCAACA TCAAAACGCC AACCCGAGAC CAAATCATTG GCAACCTTTC TGGTGGTAAC CAGCAGAAAG TGGCCATCGC AAAAGGGTTG ATGACCAAAC CTAAAGTTCT GATTCTGGAT GAGCCAACTC GCGGCGTTGA CGTAGGTGCG AAGAAAGAAA TCTATCAGCT AATCAACAAA TTTAAAGCCG ACGGCATGAG CATCATCTTG GTTTCATCTG AGATGCCAGA AGTGCTAGGC ATGAGTGACC GCATTATAGT GATGCACGAA GGTCGCATTA CTGGCGAATT CGATGCGAAA GACGCCGACC AAGAAACACT ACTCGCTTGT GCCGTAGGCA AGAAGATCAA TGAGGAAGCA GCATGA
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Protein sequence | MAQAILQLSE IEKAFPGVKA LDKASLNVYP GRVMALMGEN GAGKSTLMKV LTGIYHMDAG SIKYQGQPAA FKGPRDSQEA GISIIHQELN LIPELTIAEN IYLGREFTGS MGRIQWGKMY EEADKLLQRL NVKHSSKTLL GDLSLGEQQM VEIAKALSFE SKVIIMDEPT DALTDKETES LFKVINELRG QGCGIVYISH RLKEIFEICD DITVLRDGKF IGECEVKDTN EDGLIEMMVG RKLEEQYPRI DVKHGDVCLE VIGLTGSGVH DINFTLQRGE ILGVSGLMGA GRTELMKVIY GALPSERGVI NLDNKTINPV SPQDGLANGI AYISEDRKGD GLVLGLSVKE NMSLCALDKL TKGFQIQHGE EVVAVEDFIK LFNIKTPTRD QIIGNLSGGN QQKVAIAKGL MTKPKVLILD EPTRGVDVGA KKEIYQLINK FKADGMSIIL VSSEMPEVLG MSDRIIVMHE GRITGEFDAK DADQETLLAC AVGKKINEEA A
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