Gene VIBHAR_06112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06112 
Symbol 
ID5556656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1273422 
End bp1274180 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content46% 
IMG OID640910586 
Producttranscriptional regulatory protein CpxR 
Protein accessionYP_001448232 
Protein GI156977326 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAGCC CAGTACTAAG CGATATTCAT ACAAAGCCAT TTAGATCTTC GAGCCAACCC 
TCTCCCGCTC CATCAATTTT GTTGGCCGAA GATGACCCAG ACCTGAACCT ACAACTTACA
GAGCTTCTTA AAGCACAGTG CTACAACGTT GTGTCAATGC TTGAGGGAGA CACCGCGTTA
AAGGCATTCC AGCAACAAAC CTTCGACTTG GTCATTCTGG ACGTTAACTT ACCCAACCTA
GACGGCTTTG AAGTACTCAA TGTGATTCGC TCTCAGTCAC AAACCCCGGT TGTCATGCTT
ACCGCTTACG GTGCAGAAGA ATATCGAATT CAGGGGCTTA AATGTGGTGC CGACGATTAC
ATCACTAAAC CCTGTAACTT CACGGAAGTG AGCTTACGCA TTGAAGCGAT TTTGCGTCGT
ACTAAACTTA TCCAACAGCC CAACTCCCCC ACACAATTGA GTGAAAGAGA ACTGCTGCTC
GATAAACTAA ATCACACAGT CAATATACAT CATCGCCCTG AGCTGACCCC AATTCAGCTG
ACCCCTATTC AATTCATACT TCTGTGGACC TTGGTCGAGC ACCGTGAAGA AGTTTTGAGT
AAACCCTTCC TCTATCAAAC GGTTTTAGAA CGTCAGTTCA GCCAATACGA TCGCGCGCTC
GACATGCATC TAAGCCGTGT GCGTAAGCGT CTTATTGCTG AGGGTATGTC GAATGACCGA
ATCCAAACCG TGCATGGTAA AGGATATATT TTTAAATGA
 
Protein sequence
MFSPVLSDIH TKPFRSSSQP SPAPSILLAE DDPDLNLQLT ELLKAQCYNV VSMLEGDTAL 
KAFQQQTFDL VILDVNLPNL DGFEVLNVIR SQSQTPVVML TAYGAEEYRI QGLKCGADDY
ITKPCNFTEV SLRIEAILRR TKLIQQPNSP TQLSERELLL DKLNHTVNIH HRPELTPIQL
TPIQFILLWT LVEHREEVLS KPFLYQTVLE RQFSQYDRAL DMHLSRVRKR LIAEGMSNDR
IQTVHGKGYI FK