Gene VIBHAR_06088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06088 
Symbol 
ID5556965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1250747 
End bp1252048 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content47% 
IMG OID640910562 
Producthypothetical protein 
Protein accessionYP_001448208 
Protein GI156977302 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAGTT TGCAGGCGCA CGCAAACTTA TGCAACTTGA CTAATGACAC CGAACTCATA 
TTAGTCAAAC TATATAACTG TCAGCGCTGG CGTTTTCCTG TGTTACGAAG AGAACTTATT
ATGAGTGATA AACCGAAAAC AAAACCACTT CCTTCCTTTG TTGAGGGACG CCTAGACTTT
TATATTCAAG ATCTGATTGA GCAGAACGAA AACCAAAAGC ACTTGGTATT AGGGAAGCGA
CCACAACAAG GAGCGGTGGT CATGCAAAGT AACGACTACT TGTCGTTGTC CCACAATCTA
CAAATTCAAC AGGCACATCG TGATGCTATC TACGAGCACG ATGATAACGT TGTCATGTCT
GCGATTTTCT TACAAGATGA CGACTCAAAA CCTGCATTTG AAACGCAGCT CGCGGAGTAT
GTCGGTATGG GCAGTTGCCT ATTATCCCAG TCCGGATGGG CAGCCAATAT TGGCTTGTTA
CAAACGATTT GTCCGCCAGA AACACCAGTC TATATCGATT TCTTTGCACA CATGTCTTTG
TGGGAAGGGA TTCGAGCGGC AGGAGCGCAA GCGCATCCAT TCATGCATAA CAACATGAAC
CATTTGCGCA AGCAGATACA GCGTAACGGC TCTGGCGTTA TCGTTGTGGA TTCGGTCTAT
AGCACGATAG GTACGATCGC CCCACTCCGC GACATCTACG AAATGGCGCG TGAGTTTGAT
TGTGCTTTGG TGGTCGATGA GTCCCACTCA TTAGGCACGC ATGGGCCAAA TGGTTCTGGC
TTGGTGAAAG CATTGGAACT CACTGAGCAA GTGGATTTCA TTACGGTGAG TTTGGCAAAA
ACATTTGCTT ATCGCGCCGG GGCGATTCTT GGTCCAGAAA AGTTGGCTAG AACGCTACCC
TTTGTCGCAT TCCCAGCCAT CTTTAGTTCG ACGGTCCTTC CACAAGAGAT CGTTCGACTT
GAAAAGACTC TCGAAGTCAT TAGAAGCGCA GATGATAAGC GAACCATGCT GTTCAAGCGC
GCTAAAGAGC TCAGAACAGG CCTAAAGCAG ATTGGCTTTC ATATCCGCAG CGAATCGCAA
ATTGTGGCGT TAGAATGCGG TAGTGAGCGA AATACGGAAC GAGTGCGTGA CTTCTTAGAA
GAACGAAACG TGTTTGGCGC TGTATTCTGT CGTCCTGCAA CGGGCAAGAA TAAGAACATT
ATTCGATTTT CGATCAATGC TGATATGACA TCTCGTGACA TTGACCATGT CTTGACGGCT
TGTCAGGAAG CGTATAACCA CCCAGAACTA GAATTCGCCT AA
 
Protein sequence
MRSLQAHANL CNLTNDTELI LVKLYNCQRW RFPVLRRELI MSDKPKTKPL PSFVEGRLDF 
YIQDLIEQNE NQKHLVLGKR PQQGAVVMQS NDYLSLSHNL QIQQAHRDAI YEHDDNVVMS
AIFLQDDDSK PAFETQLAEY VGMGSCLLSQ SGWAANIGLL QTICPPETPV YIDFFAHMSL
WEGIRAAGAQ AHPFMHNNMN HLRKQIQRNG SGVIVVDSVY STIGTIAPLR DIYEMAREFD
CALVVDESHS LGTHGPNGSG LVKALELTEQ VDFITVSLAK TFAYRAGAIL GPEKLARTLP
FVAFPAIFSS TVLPQEIVRL EKTLEVIRSA DDKRTMLFKR AKELRTGLKQ IGFHIRSESQ
IVALECGSER NTERVRDFLE ERNVFGAVFC RPATGKNKNI IRFSINADMT SRDIDHVLTA
CQEAYNHPEL EFA