Gene VIBHAR_06055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06055 
Symbol 
ID5557295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1229836 
End bp1231008 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content48% 
IMG OID640910529 
Producthypothetical protein 
Protein accessionYP_001448175 
Protein GI156977269 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGGAA TAAACCGAAA CGAGCGATCG CAATCACCGA AATACGCACT TGAGTTCTCA 
CCAGCTGTGC TCAAAGTGCT GGAATATGTT CGTCCTAAGT ATGCTTGTCG TCAGTGCGAG 
CAAACTGAAG ACAACAGCCA CATCGTTCAA AAACCAGCGC CCCAGAGCAT CATCCCTAAA 
AGCTTCGCGA CAGAAAGCTT GCTGGCCAAT ATCATCCTTG GTAAATATCA ATACGCAATG 
CCCCTTTACC GCCAAGAGTC GCTGTTTACT CAGTCGGGTA TTGAGCTATC GCGAACTACC 
ATGGCAAGGT GGGTTATCCA AGTCAGTGAG AAGTTCAAAC CCCTCTATGC CGCCTTAAAA 
GAGCATCTAC TTCAACAAGT GGTGGTTCAG GCGGATGAAA CGCCGCTCAA TGTCCTTAAA 
GAAGATAAAA AGTGTTATAT GTGGCTCTAC TGCTCGGGCG CAGACTCGCC CGACGCTGCA 
CTGCCGAATG TGAAGAATAT CGCCTTGTAC GACTATCAAA ACAGTCGCGC GAGGGTATGC 
CCTGTTGCCT TCTTGGGGGA TTACAGTGGT TATCTGCAAA CCGATGGCTA TGGTGCCTAT 
GATGGTCTTC ATCACGTAAC CAATGTTGGT TGCTTGGCGC ATGCACGGCG TAAGTTCATG 
GATGCTAAGA AGCTTCAAGG TAAAGGTAAG TCAGGCAAAG CAGATAAAGC GCTGGCCAAA 
ATCCAGAAGC TCTATGGGAT AGAATCGCGC TTAAAAGGTG CGACTGTCGA AACACGAAAA 
GCAGAACGTC AACAGCATGC CAAGCCGATA CTGGATGAGC TGCACGACTG GATGACGTCT 
CAACAAGTAA TAAGCTCTAG TCCATTAGGA AAAGCGATTA AGTATACGCT CGGCCAATGG 
CCCAAGCTCA TCCGCTATAT CGATGACGGT CATTTATCTA TCGATAATAA TCGTGCTGAA 
CGCGCCATTA AACCGCTGGT CATTGGCAGA AAAAATTGGC TGTTCTCAAA CACACCAAAT 
GGTGCTGATG CGAGCGCGAT GCTTTACAGC ATCGTCGAGA CAGCGAAAGC CAACGGCCTT 
ATCCTCTACG ACTACATGGT CAAGTGCATG AAAGAGCTCG CGAAAGCTGA GCCTGATATC 
GATGCGCTCC TACCTTGGAA CTTCAAACAT TAA
 
Protein sequence
MIGINRNERS QSPKYALEFS PAVLKVLEYV RPKYACRQCE QTEDNSHIVQ KPAPQSIIPK 
SFATESLLAN IILGKYQYAM PLYRQESLFT QSGIELSRTT MARWVIQVSE KFKPLYAALK 
EHLLQQVVVQ ADETPLNVLK EDKKCYMWLY CSGADSPDAA LPNVKNIALY DYQNSRARVC 
PVAFLGDYSG YLQTDGYGAY DGLHHVTNVG CLAHARRKFM DAKKLQGKGK SGKADKALAK 
IQKLYGIESR LKGATVETRK AERQQHAKPI LDELHDWMTS QQVISSSPLG KAIKYTLGQW 
PKLIRYIDDG HLSIDNNRAE RAIKPLVIGR KNWLFSNTPN GADASAMLYS IVETAKANGL 
ILYDYMVKCM KELAKAEPDI DALLPWNFKH