Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05990 |
Symbol | |
ID | 5557841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1177110 |
End bp | 1179683 |
Gene Length | 2574 bp |
Protein Length | 857 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640910464 |
Product | hypothetical protein |
Protein accession | YP_001448110 |
Protein GI | 156977204 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGAGAA GAGAAATGTG GCGAAAATCG ATAGCAAGCT TGTTATTGCT TGTATTGTTT GGATGTGGCG GAGAAGGGGA TAAAGGGGAT AACGCCTCCA CCGCCACCGA TAATGTTCTG GCCGATAATG TTCTGGCGCC TTTAGCCAGT GATGCCTTTA ACCAGTTGTC AATGGCGGAT GGTCAAACGC AAGTGTCTTT GAAAGAATCG GTGGTTGACC CGCAAGGATT GCCGGTGACA CTGGAGTCGG TGACGGTGAG TCATGCTGAT TGTCCAGCGC CCACGAGCAT CAATCGAGAG CAACTCAGCT TTACGGTCGA AGCGAATGGG CCCGACATGT GTTTTTATGG TTATACGGTC AAAAACCATC CCAAAGAGAT CGAGCACGCG AAGTCTGCGA GTGCGCAAAG CAATGTGATG ATAAACTTGA CCTCAGACCC CGCGCAGTTG GCACCAAAAT CTAGGACGAC GAATGTGGAT GAGACCATCA CGATAGAGGT GCGTGACCCG GATTTAACCG CCGGTTATAC CCTCGACCGT GAGGTTGTGG TGATGGGTGA TGGCGTCGCC AGTGGTAATA GCGAGACGGA TGTAATCACT TATGAGGCGA ACTCTCAGGG GGTGACACGT TTGGTGTACA CCATGACGAA CGCCGATGGC AGTGCGCTTT TAGTGGGGAC GGTTGACGTG GCGGTGTCAG GCCCCGGAAA TCATGCGCCA GTGGCGACAG ATGCGTCGTT TAGGATGGAA TCTGATGAAT CGCCCAAAAC ATTTGACCTC AGTGCTTATG TTAGTGATGA GGATGATGGT GATGACATCC AGCTTATTCT AGTTGACGCG TGGAATGCGC AGGTTGATTT AGCGGCGCCG GATGACACTA GCAATCTTTC GTTTACCTTT AAACCGGACC ATGCTGGGTT TCACTATGTG AAGTATGTGG TGACTGACCA TAAAGGCGGT TATGGTGTCG CGCAAGTAAA AATTGAGGTG GTTGACCTCT CTGCGGGGGC GACATGGGGA AATATCCAGA TGGGGCTTAA ATTGTTTTTT GGCCCATTGA CGAGCTCAGA AGCAGATTTA CAAGGAGTCA CTTCTACGAG TTCTAATTTT GATAGTAATG ATGCTGACGT GGCGACGTTT AACTTCGCTC GCGCTGAAGA TTCCTGTCAA AGTAAGGGGC GCTTGCCGAC TTCTGATGAA CTAAAGGCGC TTGCCCAATA CAACAACGGT CAGGTAATTT CCGACGGTTG GCCGGTGGAT TTGGCTTATT GGGCGAATAA TAATGGTACT GGTGAGCTGA TTGATTTGAA GAACAACGGG TCAGTGGTAC CGGAAACCAA CCCTGGTGGT TACTATGTGT CTTGCATGAA TGAAGCGGGC CTTGTTGTGG TGGACGCCGA TTCTAGGCTT GAGGCGGTAG CGGATGATGC CGAACAGGCA GTCGTAGCGG TGAAGTTGAC TCGGGACGAT ATGCCCGTAG AAGGTCAGTT GCTTGAGGCG TCAGCCCCCA ACCGGACTAA TGTGACCTTT GACGATACAA CTCTCTATAC AAACGACAAA GGGGTAGCCA AGTTTGCCTT AAACACTTGG GAAGCAGGAC AGGTTCCGGT CAATATCAAG TACGACGGCG AAACGTTGTT GACGCAAAAT GTGACGTTTG TTGCGGATGA AGCTACTGCT CGTTTAGTGC TTGAGGTAAC CAAAAATAAT GTATCATATG ATGATTCAAC TGGTAATGAG GTTGAGGCTA CAATGTTGGA CGACAATAAC AATCCGTTGG TGGGGCGCCC GGTAACCTTT ACGTCGCCTG AGGAACAATC TGTCACCATT AATAAGGGCT CTGAAGTTAC GGATGCTACG GGTAAGCAGA ACGCATCAGT GGTTTGGAAG GATAGTTCGA CAACTGATAC CTCTACAACT GTTACTGTCA CCGGAAGTTA TACCCCCCAA TCTACGGGAA CTCCAATTTC AGATACCGCC GAGATAACGT TTATTTCACC ACAGCCGACA CTGAAGATTT GTGGTGAAAG AATAAACGAC ACCAACAAAA GGAATGCTGC AGGCAACTGT CTGAAAATTG CTACTGATCG TAATGATTTA TGGTTTACCA GCTCGCCAAG CGTTGCAGTG ATGGACCAGC TTGGGTATAG CATAAACGAT GAGAGCAACA ACACTGGTGA TACATATGCA GGTTCGTTTT ACGAGGATGG ACAGTTTGGG CCTAGAGGTT ATTATGCGGT GTTTATGCAG GCTGGTGATG GTGTCTCTCC CCCTGGTAGT GCTAATGCCG GTGTTAACGG GCAGTTTGAC CGTTGGTGCC AAAAGCTTAA TGATTTTGGG TTTGGTGGAA GAACAACATG GGAGCGCCCA ACACTGGCTG AGTTGGTCTC ACTTCAGGAC ACTTATGACA ACCTGTTGTT AAGGCGTGGT TTTCCGGTCC GGTTCAATTA CTGGTCGTCG GATGTCAAAG TCGATAGTTA CGACTTCTAC ACTGCGTCCC TGAGATATTA CTCACCCAGC TGGAGCCGAC CCGATTCCAT GAACTTCGGG TCCTGCATCT CAAAACGTCC TTAG
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Protein sequence | MERREMWRKS IASLLLLVLF GCGGEGDKGD NASTATDNVL ADNVLAPLAS DAFNQLSMAD GQTQVSLKES VVDPQGLPVT LESVTVSHAD CPAPTSINRE QLSFTVEANG PDMCFYGYTV KNHPKEIEHA KSASAQSNVM INLTSDPAQL APKSRTTNVD ETITIEVRDP DLTAGYTLDR EVVVMGDGVA SGNSETDVIT YEANSQGVTR LVYTMTNADG SALLVGTVDV AVSGPGNHAP VATDASFRME SDESPKTFDL SAYVSDEDDG DDIQLILVDA WNAQVDLAAP DDTSNLSFTF KPDHAGFHYV KYVVTDHKGG YGVAQVKIEV VDLSAGATWG NIQMGLKLFF GPLTSSEADL QGVTSTSSNF DSNDADVATF NFARAEDSCQ SKGRLPTSDE LKALAQYNNG QVISDGWPVD LAYWANNNGT GELIDLKNNG SVVPETNPGG YYVSCMNEAG LVVVDADSRL EAVADDAEQA VVAVKLTRDD MPVEGQLLEA SAPNRTNVTF DDTTLYTNDK GVAKFALNTW EAGQVPVNIK YDGETLLTQN VTFVADEATA RLVLEVTKNN VSYDDSTGNE VEATMLDDNN NPLVGRPVTF TSPEEQSVTI NKGSEVTDAT GKQNASVVWK DSSTTDTSTT VTVTGSYTPQ STGTPISDTA EITFISPQPT LKICGERIND TNKRNAAGNC LKIATDRNDL WFTSSPSVAV MDQLGYSIND ESNNTGDTYA GSFYEDGQFG PRGYYAVFMQ AGDGVSPPGS ANAGVNGQFD RWCQKLNDFG FGGRTTWERP TLAELVSLQD TYDNLLLRRG FPVRFNYWSS DVKVDSYDFY TASLRYYSPS WSRPDSMNFG SCISKRP
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