Gene VIBHAR_05970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05970 
Symbol 
ID5558845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1158952 
End bp1159575 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content46% 
IMG OID640910444 
Producthypothetical protein 
Protein accessionYP_001448090 
Protein GI156977184 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA GTATTTACGA TGAATACCCG TCAATGACGT TGGCAAAAGA GCAGCAAGAC 
CAAAATATTG AACCGCTTAA GCTCGGTCAA CGCATCAAAG ATATCCGCTC CAAACTCGGC 
ATTACGTTAG AAGAGGCAAG CCAACGTACT GGCCTGGCGC GTTCTACGCT AAGTAAGATA 
GAGAACGAAC AGATTTCTCC GACGTTCCAA GCCATGCAAA AATTAGCGCA CGGCTTGCAA 
ATCGATATGC CGCAACTGTT TGAACCGCCA AGAAAAAAGG TGGCGACAGG GCGTAGAGAT 
GTGACCAAGA AGAAAGAGGG TAAACCACAC CCAACCCAAA CCTACGAGCA TGAGCTTCTG 
GCGACTCAAC TTTCCAATAA GAAAATGATG CCTTTTAAGA GCCAAATCCG TGCCCGCAGT 
TTTGATGAAT ACAAAGACTG GGTTCGTCAC GATGGCGAAG AGTTTTTGCT TATCTTATCC 
GGAGAAGTGA TGTTTTATTC TGAGTTCTAT GAGCCTGTTG TATTAAGCGA AGGCGACAGT 
GTGTATTACG ATGCGAACAT GGGTCATATG TTGACCAGTG TGAGTGAGGA AGACGCGCAC 
ATTTTGTGGG TCACAGCCAA ATAG
 
Protein sequence
MAESIYDEYP SMTLAKEQQD QNIEPLKLGQ RIKDIRSKLG ITLEEASQRT GLARSTLSKI 
ENEQISPTFQ AMQKLAHGLQ IDMPQLFEPP RKKVATGRRD VTKKKEGKPH PTQTYEHELL 
ATQLSNKKMM PFKSQIRARS FDEYKDWVRH DGEEFLLILS GEVMFYSEFY EPVVLSEGDS 
VYYDANMGHM LTSVSEEDAH ILWVTAK