Gene VIBHAR_05968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05968 
Symbol 
ID5558913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1157566 
End bp1158696 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content49% 
IMG OID640910442 
Productglycine cleavage system protein T2 
Protein accessionYP_001448088 
Protein GI156977182 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0404] Glycine cleavage system T protein (aminomethyltransferase) 
TIGRFAM ID[TIGR00528] glycine cleavage system T protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACGA AAATGACTCA AGAACTTCTG AAAACACCAC TGCATGCACT TCATGTTGAA 
GTAGGCGCAA AGATGGTCCC GTTCGCGGGT TACGACATGC CAGTTCAATA CCCACTAGGC 
GTTAAGAAAG AACACTTACA CACACGTGAT GCAGCAGGTC TGTTCGATGT TTCTCACATG 
GGTCAACTTC GTTTGATTGG TGACGGTGCA GCAGCATTCC TAGAAACTTT GGTTCCAGTG 
GACATTGTTG ACCTAGGCGC AGGCAAACAG CGTTACGCGT TCTTCACTAA CGAGCAGGGC 
GGCATCATGG ACGACTTGAT GGTGGCAAAC CTTGGCGATC ATCTGTTTGT TGTAGTAAAC 
GCAGCATGTA AAGAGCAAGA CATTGCACAC CTTCAAGCGC ATCTTCCTTC TGGTATTGAG 
CTAGAAATCA TCGATGATCG TGCACTGCTT GCGATTCAAG GCCCTAAAGC GGCAGAGGTA 
CTAGCACGCT TTGCTCCTGA AGTTGCAGAG ATGCTGTTTA TGGATGTTCG CAAAGTTGAA 
CTACTCGGCG TTGAGTGCAT TATTTCTCGT AGTGGTTACA CGGGTGAAGA TGGTTACGAA 
ATCTCGGTAC CGGCTGAAAA AGCAGAAGAG CTTGCTCGTA AGCTAACTGG CGAAGAAGAA 
GTTGAGTGGA TCGGCCTTGG CGCACGTGAC TCACTGCGTC TAGAGTGTGG TCTGTGTCTA 
TACGGTCATG ACTTAGATAC AACAACAACG CCTGTTGAAG CAAGCCTACT ATGGGGTATT 
CAAAAAGTAC GTCGCGCTGA TGGCGAGCGT GCTGGTGGTT TCCCAGGTGC AGACATTATT 
CTTAAGCAAA TCGAAACAAA AGATGTTGCT CGTAAACGTA TTGGTTTAGT AGGTCAAACC 
AAAGCACCAG TGCGTGAAGG CGCGGAGCTA TTTGATGCAG AAGGCAACAA GATCGGTGTG 
GTAACCAGTG GTACAGCAGG TCCTAACGCA GGTAAGCCAG TATCAATGGG TTATGTACGC 
GCAGACCTTG CGGCGATCGG TACAGAGCTG TTCGCAGAAG TACGTGGCAA AATGCTACCA 
ATGACGGTAG AAAAAATGCC GTTCGTACCA CAACGCTACT ACCGCGGATA A
 
Protein sequence
METKMTQELL KTPLHALHVE VGAKMVPFAG YDMPVQYPLG VKKEHLHTRD AAGLFDVSHM 
GQLRLIGDGA AAFLETLVPV DIVDLGAGKQ RYAFFTNEQG GIMDDLMVAN LGDHLFVVVN 
AACKEQDIAH LQAHLPSGIE LEIIDDRALL AIQGPKAAEV LARFAPEVAE MLFMDVRKVE 
LLGVECIISR SGYTGEDGYE ISVPAEKAEE LARKLTGEEE VEWIGLGARD SLRLECGLCL 
YGHDLDTTTT PVEASLLWGI QKVRRADGER AGGFPGADII LKQIETKDVA RKRIGLVGQT 
KAPVREGAEL FDAEGNKIGV VTSGTAGPNA GKPVSMGYVR ADLAAIGTEL FAEVRGKMLP 
MTVEKMPFVP QRYYRG