Gene VIBHAR_05966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05966 
Symbol 
ID5558911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1155194 
End bp1155919 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content46% 
IMG OID640910440 
Producthypothetical protein 
Protein accessionYP_001448086 
Protein GI156977180 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAA GAAAGCAAGG CCGTAGAAGT GCCGAAGCCG CTGAGCAAAC TAAGTGCCTG 
ATTCTTAGAG TCGCGGCAGA TATGTTCTGT GAGTTAGGGT ACGAACGAGT TTCGCTTCGC 
AACATCAGTG AGAAAGCTGG TGTGTCCCAT AGTTTGATTC GCCACCACTT CGGCAGTAAA 
GAGAAGATCT GGCAAGCAGT GAGCAACGGC ATGGATGACT TCTTGCAAAG CTATATGGTA 
CAGCTAGTCA ACGAAATGCC GGAAAATACC CCGCCTAATC AAAAAATCTA CCTGTTCATG 
GTAAGAATAC TGGCATTTGC ACTCATGAAC CCGCACCCAA TCCAAATGAT TGCGGATGCG 
ATTCGCCAAG ACGACGATGC CCTACCGCTA TACTTCTTAC GTTCGGAAGA TGAATTCGCG 
GCGATCTTCA CTCAGATATC CTCAGAATAT AATCAAGAGT GCCCTGAAAC ACCGACCGAT 
CATTGGGAAT CAAAATGGCA AATGCTGTTG TTCGCTCATG GCGCAGTAAG CTTAACGCCG 
ATGATGCAAA AAACATGGCC AGCGATGGCA GAAAACCGAG ATAAGCTACT GATCAACCAT 
TGGGAGTTGT TCAACACCAT CATGGCGAAC CAATTTGGTA TCTGCAAAGA AGACATGATT 
CACCCAGAGC ATTTAAGTGA AATCGTGATT AAGATGTGCT GTCCGATTGA AGAATTGACT 
GCTTAA
 
Protein sequence
MTERKQGRRS AEAAEQTKCL ILRVAADMFC ELGYERVSLR NISEKAGVSH SLIRHHFGSK 
EKIWQAVSNG MDDFLQSYMV QLVNEMPENT PPNQKIYLFM VRILAFALMN PHPIQMIADA 
IRQDDDALPL YFLRSEDEFA AIFTQISSEY NQECPETPTD HWESKWQMLL FAHGAVSLTP 
MMQKTWPAMA ENRDKLLINH WELFNTIMAN QFGICKEDMI HPEHLSEIVI KMCCPIEELT 
A