Gene VIBHAR_05955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05955 
Symbol 
ID5558863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp1142017 
End bp1142556 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content46% 
IMG OID640910429 
Producthypothetical protein 
Protein accessionYP_001448075 
Protein GI156977169 
COG category[S] Function unknown 
COG ID[COG2501] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAAG ATTACGAACA CGAAGAGTAT TTAGAAGGCG AAGAGATTGA GATCGAAGCG 
ATCGGTATCG ACGTTGACGC GCACCCAATT GAGCTGTACA AGCTTTTCAA AATCGCAAAC 
TTGGTGAGTG GCGGTGGTGA AGCAAAACAC ATCATCGAAG AAGGTTACGT AGCGGTAAAT 
GGTGAGCTAG AAACGCGTAA ACGTCGCAAA ATGTACGACG GTGATTTCTT TGAGTTCAAC 
CAAGAATACT ATGTTGTTGT GTGTGATGCG CCAGTGACTG AGCCAGAAAC TGCAGAGCAA 
AAAGCAGAGA AGAAGGCGAA GAAAGAAGCG CAAACGGCTC GTAAAGAAAA GTCTCGCTCG 
AAAAAGAACG AGAAAGCGAA CGTTAAGGGC CCTAAGTCGA CTGGTCGTAA AGCTGCACAC 
AAAGAGCGTA AAGCACAGAA AGAAGCGTTG TCTCAATCTG CTAAGAAAGG CAAGAAAGAC 
GACAAGCCTC AAGCGGTTCG CGATCCTAAG AGTGGCCGCA ACTCAATCGA CTTCTTCTAA
 
Protein sequence
MTQDYEHEEY LEGEEIEIEA IGIDVDAHPI ELYKLFKIAN LVSGGGEAKH IIEEGYVAVN 
GELETRKRRK MYDGDFFEFN QEYYVVVCDA PVTEPETAEQ KAEKKAKKEA QTARKEKSRS 
KKNEKANVKG PKSTGRKAAH KERKAQKEAL SQSAKKGKKD DKPQAVRDPK SGRNSIDFF