Gene VIBHAR_05947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05947 
Symbol 
ID5558409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1135322 
End bp1136515 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content47% 
IMG OID640910421 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_001448067 
Protein GI156977161 
COG category[C] Energy production and conversion 
COG ID[COG1979] Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATAT TCACTCTCCT CACATTGGAA GCTAGAGGTA TAATAATGAA CTTTTCATAC 
GTTAACCCAA CTCAAATCTT CTTCGGCCAA GGCCAAATCG CGGCAATCAA AGACGCAATT
CCTGACGACC AAAAAGTACT TGTAATCTAC GGCGGCGGCT CGATCAAGAA GAACGGTGTT
TACGATCAAG TAGCGCAAGC ATTGGAAGGC CGAGAGTGGC TTGAGTTTTC GGGTGTTGAG
CCAAATCCAA CCAAAGAAAC ACTAGATAAA GCGGTAGCTA TCGTAAAAGA ACAAAACGTT
GACTTTATCC TAGCGGTAGG TGGTGGTTCA GTTATCGATG GTTCTAAGTA CGTCGCAGCA
TCAGCAAAAT ACGACGGTGA CGGCTGGGAC ATCATGGTAG GCAAGCATCA AGTAACCGGA
GCAACGCCAC TTGCTGCCAT CCTTACTTTG CCTGCGACAG GTTCTGAGTC AAACATGGGC
GCGGTAATCA CTAAAAAAGA AACGCAAGAT AAATTGGCGT TTCTAGCACC TGCAGTTCAA
CCGAAGTTTG CAGTTCTTGA CCCAGACGTC ATGAAGACCT TACCAGAACG TCAACTTATC
AATGGTCTTG TGGATGCATG GGTTCACGTT TGTGAGCAAT ACCTAACACT ACCAACAGGC
GCAATGGTTC AGGACGGTTA CGCAGAAGCA CTACTGAAAA ACCTTAAAGT ACTGGGCGAT
CAGTTCGCAG AGCGCGATAA CGACCAATGG CGTGCCAACC TAATGTGGAC AGCAAACCAA
GCATTGAACG GTCTTATCGG TAGCGGTGTT CCTCAAGACT GGGCAACACA CATGATTGGT
CACGAACTAA CGGCGCTCTG GCACGTAGAC CACGCACGTT CACTAGCAAT AATCCAACCA
TCACTACTTC GTAACCAAAT GCAATTCAAA CGCCCTAAGC TTGAGCAAAT GGGTCGCAAC
GTGTTTGGCT TAGAAGAAGG TGAAGATTTG GCAGAGCGCA CGATTCAAGC GATCGAAGCT
TTCTACCATC ACCTAGACGT CGCAACTCAG CTTGAAGGTT ACGGTGATGA TCGTGAAGCC
GCTATTGATT CAGTCATTGC ACAGCTATCA AAGCATGGCA TGACCGTTCT TGGCGAGAAC
CAAGCGATTG ACCTAGAAAA CAGTCGAAAA ATTCTTGATC TAGCGGTCGC ATAA
 
Protein sequence
MHIFTLLTLE ARGIIMNFSY VNPTQIFFGQ GQIAAIKDAI PDDQKVLVIY GGGSIKKNGV 
YDQVAQALEG REWLEFSGVE PNPTKETLDK AVAIVKEQNV DFILAVGGGS VIDGSKYVAA
SAKYDGDGWD IMVGKHQVTG ATPLAAILTL PATGSESNMG AVITKKETQD KLAFLAPAVQ
PKFAVLDPDV MKTLPERQLI NGLVDAWVHV CEQYLTLPTG AMVQDGYAEA LLKNLKVLGD
QFAERDNDQW RANLMWTANQ ALNGLIGSGV PQDWATHMIG HELTALWHVD HARSLAIIQP
SLLRNQMQFK RPKLEQMGRN VFGLEEGEDL AERTIQAIEA FYHHLDVATQ LEGYGDDREA
AIDSVIAQLS KHGMTVLGEN QAIDLENSRK ILDLAVA