Gene VIBHAR_05938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05938 
Symbol 
ID5558459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1123286 
End bp1123999 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content46% 
IMG OID640910412 
Producthypothetical protein 
Protein accessionYP_001448058 
Protein GI156977152 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCAACG AATGGTTTGA GATATTTGTT GGCGGGGGAA GGCGTATGGC TATCAACAAT 
ATTAAGTGCG TCATATTCGA TTGTGACGGT ACGCTGGTCG ACAGCGAAAG CCTGTGTTGC
CATGCATTGG TTAATGTGTT TGAGCAATAC GGCGTAGAGA TGAGTTTTGA AGAGTGTGTT
GCACATTTCA AAGGTGGCAA GTTGGCCGAT ATCCTGCGTG ATGCCAAAGC GTTCATGAAC
GTTAATGTGT CTATTGATGT TCTTGAACCA CAATACCGTG AGGAGCTACA GAAGCTGTTT
GTCCGCCACC TAAAACCAAT GGATGGCGCA AAGCGTCTTA TTCAATTCTT GGATTCACAC
AACATCGAGT ATTGTGTGGC TTCTAATGGA CCGAAAGACA AGATCGAATA CTCGCTTGAG
CTAACAGGGC TGCTAGATGC GTTTAAAGGA AAAGTCTTTT CTGCTTTCGA CGCGAATAGT
TGGAAGCCAG AGCCTGATTT GATCATGTAT AGCGCGATGA ATATGGGTTT TCTGCCAAGC
GATTGTTTGT ATATTGATGA CACCCCAAAG GGCGTTGAGG CTGGATTAAA CGCAGGTGTG
AAAACGGTGC AGCTTTACAA CGGCGCGCCA ATCAACCGAG TGGGAGACGA GCGCGTTATC
CGAATTCATC ATCTTGACGA ACTAAAAGAG CAGCTCTTAG GCTGCTCAAT TTAA
 
Protein sequence
MFNEWFEIFV GGGRRMAINN IKCVIFDCDG TLVDSESLCC HALVNVFEQY GVEMSFEECV 
AHFKGGKLAD ILRDAKAFMN VNVSIDVLEP QYREELQKLF VRHLKPMDGA KRLIQFLDSH
NIEYCVASNG PKDKIEYSLE LTGLLDAFKG KVFSAFDANS WKPEPDLIMY SAMNMGFLPS
DCLYIDDTPK GVEAGLNAGV KTVQLYNGAP INRVGDERVI RIHHLDELKE QLLGCSI