Gene VIBHAR_05906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05906 
Symbol 
ID5558472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1098050 
End bp1099546 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content48% 
IMG OID640910380 
Producthypothetical protein 
Protein accessionYP_001448026 
Protein GI156977120 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA CGCCAAATAT CAACCCAGAA AGCCAAGATG TTGCCGAGCT ACAAGCGATG 
GTGAAAGCGC TGATGGTGTC AGAAAGCCAA TGGAAACAAG AGCGTCAATC TCTGCTTGAG
CAACTCAAAC TTGCTTTCGA CCGTCAGTTC GCAAAACGCT CGGAGGAGCT AAAGCCTTAC
GATGAATCTC AAGGTGACCT CTTCAACGAA GTGGAATGTG AAGCCGCTAA GGAAGAAGAG
GTTGAGGTAA CGACGACCAC TACAACGAAG AAGCGTGGTA AACGCAAGCC CCTTCCAAAG
ACTTTGCCTC GTGAGGTTAT CGAACTCGAT TTAGACGACC ATGAAAAACA GTGTGCCTGC
TGCCAACATA GTCTGCATAA AATCGGTGAA GACCGCAGTG AGAAACTTGA GTTCTCACCA
GCTGTGCTCA AAGTGCTGGA ATATGTTCGT CCTAAGTATG CTTGTCGTCA GTGCGAGCAA
ACTGAAGACA AAAGCCACAT CGTTCAAAAA CCAGCGCCCC AGAGCATCAT CCCTAAAAGC
TTCGCGACAG AAAGCTTGCT GGCCAATATC ATCCTTGGTA AATATCAATA CGCAATGCCC
CTTTACCGCC AAGAGTCGCT GTTTACTCAG TCGGGTATTG AGCTATCGCG AACTACCATG
GCAAGGTGGG TTATCCAAGT CAGTGAGAAG TTCAAACCCC TCTATGCCGC CTTAAAAGAG
CATCTACTTC AACAAGTGGT GGTTCAGGCG GATGAAACGC CGCTCAATGT CCTTAAAGAA
GATAAAAAGT GTTATATGTG GCTCTACTGC TCGGGCGCAG ACTCGCCCGA CGCTGCACTG
CCGAATGTGA AGAATATCGC CTTGTACGAC TATCAAAACA GTCGCGCGAG GGTATGCCCT
GTTGCCTTCT TGGGGGATTA CAGTGGTTAT CTGCAAACCG ATGGCTATGG TGCCTATGAT
GGTCTTCATC ACGTAACCAA TGTTGGTTGC TTGGCGCATG CACGGCGTAA GTTCATGGAT
GCTAAGAAGC TTCAAGGTAA AGGTAAGTCA GGCAAAGCAG ATAAAGCGCT GGCCAAAATC
CAGAAGCTCT ATGGGATAGA ATCGCGCTTA AAAGGTGCGA CTGTCGAAAC ACGAAAAGCA
GAACGTCAAC AGCATGCCAA GCCGATACTG GATGAGCTGC ACGACTGGAT GACGTCTCAA
CAAGTAATAA GCTCTAGTCC ATTAGGAAAA GCGATTAAGT ATACGCTCGG CCAATGGCCC
AAGCTCATCC GCTATATCGA TGACGGTCAT TTATCTATCG ATAATAATCG TGCTGAACGC
GCCATTAAAC CGCTGGTCAT TGGCAGAAAA AATTGGCTGT TCTCAAACAC ACCAAATGGT
GCTGATGCGA GCGCGATGCT TTACAGCATC GTCGAGACAG CGAAAGCCAA CGGCCTTATC
CTCTACGACT ACATGGTCAA GTGCATGACA GAGCTCGCGA AAGCTGAGCC TGATTGA
 
Protein sequence
MKKTPNINPE SQDVAELQAM VKALMVSESQ WKQERQSLLE QLKLAFDRQF AKRSEELKPY 
DESQGDLFNE VECEAAKEEE VEVTTTTTTK KRGKRKPLPK TLPREVIELD LDDHEKQCAC
CQHSLHKIGE DRSEKLEFSP AVLKVLEYVR PKYACRQCEQ TEDKSHIVQK PAPQSIIPKS
FATESLLANI ILGKYQYAMP LYRQESLFTQ SGIELSRTTM ARWVIQVSEK FKPLYAALKE
HLLQQVVVQA DETPLNVLKE DKKCYMWLYC SGADSPDAAL PNVKNIALYD YQNSRARVCP
VAFLGDYSGY LQTDGYGAYD GLHHVTNVGC LAHARRKFMD AKKLQGKGKS GKADKALAKI
QKLYGIESRL KGATVETRKA ERQQHAKPIL DELHDWMTSQ QVISSSPLGK AIKYTLGQWP
KLIRYIDDGH LSIDNNRAER AIKPLVIGRK NWLFSNTPNG ADASAMLYSI VETAKANGLI
LYDYMVKCMT ELAKAEPD