Gene VIBHAR_05897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05897 
Symbol 
ID5558219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1088692 
End bp1089468 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content43% 
IMG OID640910371 
Producthypothetical protein 
Protein accessionYP_001448017 
Protein GI156977111 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTCA TCGAGCATTT GACTGAGAAA ACCTACTTTC ATACGCGTCA AATCGTTGCT 
TACATCGAGA CGGAATTCGG CGTGAGCTAC ACCGTTGCAG GCATGAACAA GTGGTTACAT
CACCACGGTT TTTCATACAA AAAGCCCAAA GGTGTTCCGC ACAAGCTAAA ACCTGAAGAG
CAACAAGCGT TTATCGAGTA TTACAATGAG GTACTTAAGT CCAATAATGC ACCTGTGCTT
TTCATGGATG CCGTTCATCC GACTCAATCA ACAAAGCTCA GTTATGGCTG GATCCGAAAA
GGACAGGATA AGCTTATTGA AACGACAGGT AGCCGTACTC GAGTGAATTT AATCGGAGCT
CTGTCACTGA AAGACATTAG CGCAACGATT ACAGATACTT ATGAAACGAT AGATGGCGAG
AGCATTGTTC GCTTCTTTTG GAAACTCAAG AAAGAGCATT ATCCACTAGA GCAAACCGTG
CATATTGTGC TTGATGGTGC AGCCTACCAT CGGTCAGAAA TGGTGAGAAA TGCGGCAAAA
GTGCTCAATG TAGAGCTTCA TTACTTACCA CCATACAGCC CAAACTTAAA TCCAATAGAG
CGGCTTTGGA AAGTAATGAA TGAGCATGTG AGGAACAATG TCTATTTTCC CTCCAAAGCA
GCATTCACCT CTGCTATCAA AACGTTTTTT GATGTGACGC TACCAGAAGT TGCAGGCTCA
CTTGTATCCA GAATTACGGA TAATTTTCAG ATATTGAAGC CTGCATCTTC AAGTTGA
 
Protein sequence
MQLIEHLTEK TYFHTRQIVA YIETEFGVSY TVAGMNKWLH HHGFSYKKPK GVPHKLKPEE 
QQAFIEYYNE VLKSNNAPVL FMDAVHPTQS TKLSYGWIRK GQDKLIETTG SRTRVNLIGA
LSLKDISATI TDTYETIDGE SIVRFFWKLK KEHYPLEQTV HIVLDGAAYH RSEMVRNAAK
VLNVELHYLP PYSPNLNPIE RLWKVMNEHV RNNVYFPSKA AFTSAIKTFF DVTLPEVAGS
LVSRITDNFQ ILKPASSS