Gene VIBHAR_05877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05877 
Symbol 
ID5556650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1072915 
End bp1074612 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content45% 
IMG OID640910351 
Producthypothetical protein 
Protein accessionYP_001447998 
Protein GI156977092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTAG TTTGCAAATT TATACCTAGC TCGAAGCTTT CCTCCAACGA GCTATCCTAC 
GTCCTTACAC CTGATGAATG TATAGGGCAG CTTTCGCGTG TGCGAAATTC AGAAAATATT
CTCAGAAACC TGCCTAAAGA GCTTGCTCAG AAGATCTCAA TCTCTGCCAA AAAGTCTAGC
GCCGGCTTGC TAACGGCTAT TCGAAATGAG CTAGGAAATG GTAACTGGGT GGCGTTGTCT
TCCTTCTCTC GTAGAACGCC GTTAACGGAT GCTCAATTAC AAAGTTTCCC AAGACTAAAA
GCACAGCTTG AATCTGTCTC ATCGACTGGT GAGAGTAAAG TTTATAAAGC AGGTTATAAG
CAGGTAACGG ACGATGTGAC ATTGGTTCGC AGTTACGCGC ATGTGCCTTA TGAACCAAGT
CCAGAACATA AAATCGTTGT CGAGTTTGCT GGGCAGTGGT CTAGCAATGC AGCCTGTTTG
ATGTTGGGAA AAACCGACGC ACAAAAAGAA AAAGTGACTG TAAGTAAGGC TGATACCGAG
AACAAACACC GCAGCCTTGC CACGTTTAAA GATCTGGATG CTGAAGGCAA AACGCTTTAT
ATCAAAATCC CTTGTTCCGA CCAGCCTCAG CCAATCTTGC TTAAACTCGC TGAAGACCTG
CAACCAGTCG ATAAAGAAAC TCAGATGGAT GAGTGGGATA ACGTGTTGGT GCCGGTCAGA
CCTTTGGCTT ACTTAGATGG TAGCAACGAC AAAGCAAAAG CTTCTGACCT GCGTGGTGGT
TTCCTTTATG TGTTTTGGAA AGGAAAGCTT TGGCGAGAGA TGGCGATAAA CGAGAAAGGT
TACTACCAAG ATGTTGACGT CGAGTATTAC CGCACGCTAG AGCAAGAAGA AAAGAAAAAA
GACACACCTC AGGTAATACA AAGAAGCGCA AGCGGTTTTG CTATGGCGCA TTTCTGGGCA
CCTTACAAAA TATCGGGTGA AGTCCAACAG GGAGAAAATG GACTCAAGTT CATTTTCTCA
CCAAAGCAAA AGCGCTTTGC TCAAATTGAA GCATTAGAAT CAGATGCTGC TTTGCTTGAG
AAATCCAGCA CACCATTAGA TGAATTAAGC AGTTACAGTG ACGCACAGTC ATTCAGTTCA
CAAGAATTCA CCTCCGATGT AGACAGTGCC GCCATCCACA AAGTTACCGA AGACGACATG
CCATGGCTGA GTGACCAACA AGCCATCGTT CGCAGTTATG ACCAGAGTAA TACGGTCATT
GCTTATGTGG ATGGCAAAAA CAGTGGTTTT CTTGTCCGTT TGGAAGTTGG CTTGGCAGAT
GGCCCATTGG CAGAACAGCT AGACCCTTAC TCGTTGGCTT CGTATGACGG CTTGGTTGCC
ATTATGGAGG ATTCTGAAAG TGACTGGCGA GTGACCGAGC CCTTTGAGTT AATCAGTAAG
GATGGTTATA TCAGTGCCTT AGTGACAGGT ATGCCTCCCA AAGGAAAGTT TACACTTGTG
CTTTCGCACC TTGGGGGGCA AGACAGCGAG GTGATGATGT TTGAAGGGCT GACGTACCAA
GAGATCACCG CAGAACCACC AGAATTACCG ATGGCTTCTA AGCACGAAGA ACAGCGAGTG
CCTGATGAAG TTAATGAAGA AAGAGAGCGT CAAAAGAAGA CATTAGACAT GATGCTAGAG
CTTATCAACG CCAATTAA
 
Protein sequence
MHLVCKFIPS SKLSSNELSY VLTPDECIGQ LSRVRNSENI LRNLPKELAQ KISISAKKSS 
AGLLTAIRNE LGNGNWVALS SFSRRTPLTD AQLQSFPRLK AQLESVSSTG ESKVYKAGYK
QVTDDVTLVR SYAHVPYEPS PEHKIVVEFA GQWSSNAACL MLGKTDAQKE KVTVSKADTE
NKHRSLATFK DLDAEGKTLY IKIPCSDQPQ PILLKLAEDL QPVDKETQMD EWDNVLVPVR
PLAYLDGSND KAKASDLRGG FLYVFWKGKL WREMAINEKG YYQDVDVEYY RTLEQEEKKK
DTPQVIQRSA SGFAMAHFWA PYKISGEVQQ GENGLKFIFS PKQKRFAQIE ALESDAALLE
KSSTPLDELS SYSDAQSFSS QEFTSDVDSA AIHKVTEDDM PWLSDQQAIV RSYDQSNTVI
AYVDGKNSGF LVRLEVGLAD GPLAEQLDPY SLASYDGLVA IMEDSESDWR VTEPFELISK
DGYISALVTG MPPKGKFTLV LSHLGGQDSE VMMFEGLTYQ EITAEPPELP MASKHEEQRV
PDEVNEERER QKKTLDMMLE LINAN