Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05877 |
Symbol | |
ID | 5556650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1072915 |
End bp | 1074612 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640910351 |
Product | hypothetical protein |
Protein accession | YP_001447998 |
Protein GI | 156977092 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTTAG TTTGCAAATT TATACCTAGC TCGAAGCTTT CCTCCAACGA GCTATCCTAC GTCCTTACAC CTGATGAATG TATAGGGCAG CTTTCGCGTG TGCGAAATTC AGAAAATATT CTCAGAAACC TGCCTAAAGA GCTTGCTCAG AAGATCTCAA TCTCTGCCAA AAAGTCTAGC GCCGGCTTGC TAACGGCTAT TCGAAATGAG CTAGGAAATG GTAACTGGGT GGCGTTGTCT TCCTTCTCTC GTAGAACGCC GTTAACGGAT GCTCAATTAC AAAGTTTCCC AAGACTAAAA GCACAGCTTG AATCTGTCTC ATCGACTGGT GAGAGTAAAG TTTATAAAGC AGGTTATAAG CAGGTAACGG ACGATGTGAC ATTGGTTCGC AGTTACGCGC ATGTGCCTTA TGAACCAAGT CCAGAACATA AAATCGTTGT CGAGTTTGCT GGGCAGTGGT CTAGCAATGC AGCCTGTTTG ATGTTGGGAA AAACCGACGC ACAAAAAGAA AAAGTGACTG TAAGTAAGGC TGATACCGAG AACAAACACC GCAGCCTTGC CACGTTTAAA GATCTGGATG CTGAAGGCAA AACGCTTTAT ATCAAAATCC CTTGTTCCGA CCAGCCTCAG CCAATCTTGC TTAAACTCGC TGAAGACCTG CAACCAGTCG ATAAAGAAAC TCAGATGGAT GAGTGGGATA ACGTGTTGGT GCCGGTCAGA CCTTTGGCTT ACTTAGATGG TAGCAACGAC AAAGCAAAAG CTTCTGACCT GCGTGGTGGT TTCCTTTATG TGTTTTGGAA AGGAAAGCTT TGGCGAGAGA TGGCGATAAA CGAGAAAGGT TACTACCAAG ATGTTGACGT CGAGTATTAC CGCACGCTAG AGCAAGAAGA AAAGAAAAAA GACACACCTC AGGTAATACA AAGAAGCGCA AGCGGTTTTG CTATGGCGCA TTTCTGGGCA CCTTACAAAA TATCGGGTGA AGTCCAACAG GGAGAAAATG GACTCAAGTT CATTTTCTCA CCAAAGCAAA AGCGCTTTGC TCAAATTGAA GCATTAGAAT CAGATGCTGC TTTGCTTGAG AAATCCAGCA CACCATTAGA TGAATTAAGC AGTTACAGTG ACGCACAGTC ATTCAGTTCA CAAGAATTCA CCTCCGATGT AGACAGTGCC GCCATCCACA AAGTTACCGA AGACGACATG CCATGGCTGA GTGACCAACA AGCCATCGTT CGCAGTTATG ACCAGAGTAA TACGGTCATT GCTTATGTGG ATGGCAAAAA CAGTGGTTTT CTTGTCCGTT TGGAAGTTGG CTTGGCAGAT GGCCCATTGG CAGAACAGCT AGACCCTTAC TCGTTGGCTT CGTATGACGG CTTGGTTGCC ATTATGGAGG ATTCTGAAAG TGACTGGCGA GTGACCGAGC CCTTTGAGTT AATCAGTAAG GATGGTTATA TCAGTGCCTT AGTGACAGGT ATGCCTCCCA AAGGAAAGTT TACACTTGTG CTTTCGCACC TTGGGGGGCA AGACAGCGAG GTGATGATGT TTGAAGGGCT GACGTACCAA GAGATCACCG CAGAACCACC AGAATTACCG ATGGCTTCTA AGCACGAAGA ACAGCGAGTG CCTGATGAAG TTAATGAAGA AAGAGAGCGT CAAAAGAAGA CATTAGACAT GATGCTAGAG CTTATCAACG CCAATTAA
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Protein sequence | MHLVCKFIPS SKLSSNELSY VLTPDECIGQ LSRVRNSENI LRNLPKELAQ KISISAKKSS AGLLTAIRNE LGNGNWVALS SFSRRTPLTD AQLQSFPRLK AQLESVSSTG ESKVYKAGYK QVTDDVTLVR SYAHVPYEPS PEHKIVVEFA GQWSSNAACL MLGKTDAQKE KVTVSKADTE NKHRSLATFK DLDAEGKTLY IKIPCSDQPQ PILLKLAEDL QPVDKETQMD EWDNVLVPVR PLAYLDGSND KAKASDLRGG FLYVFWKGKL WREMAINEKG YYQDVDVEYY RTLEQEEKKK DTPQVIQRSA SGFAMAHFWA PYKISGEVQQ GENGLKFIFS PKQKRFAQIE ALESDAALLE KSSTPLDELS SYSDAQSFSS QEFTSDVDSA AIHKVTEDDM PWLSDQQAIV RSYDQSNTVI AYVDGKNSGF LVRLEVGLAD GPLAEQLDPY SLASYDGLVA IMEDSESDWR VTEPFELISK DGYISALVTG MPPKGKFTLV LSHLGGQDSE VMMFEGLTYQ EITAEPPELP MASKHEEQRV PDEVNEERER QKKTLDMMLE LINAN
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