Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05859 |
Symbol | |
ID | 5557609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1046346 |
End bp | 1047344 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640910333 |
Product | hypothetical protein |
Protein accession | YP_001447980 |
Protein GI | 156977074 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTACAA CACTTACTGA TAAGTCGTAT GAGTTCAGCT TCTATCAAGC GGTATTGTTG CTTGAGAAGC ACTACCAGCT AGAGCCAAAT TCTAACTTTG TCGCGGTTGG TGAGAACAAG TACTTCCACC AAGAGCGCAT AGAGTTTAGT GTCTCGCCGA GTATGGCTTT TCCAAAGAGT GATATGGAAT TTATCACTCA CATGGAAAGA AATGGGCAAC AGTATTCGCG CGTCGAGACG AACTTTTTAG GTTTACATGG GTCAAGTTCG CCATTGCCAG CGTCGTATAC CGAAAAGCTT GCTGGTCGTG ACCCAGATGA TAACCCGGTA AAAGACTTCT TTGATTTCTT CCACAATCGT TACACTAGCT TACTGTACCG TGTCTGGAAG AAATACCGTT ATCACGTACA GTACCAAAGC GGTGCAAGTG ACGCGTTCTC AGGGCGGATC CTGCATTTGG CCGGCCTGTC TGATGTCATG CAAGATTGCG ATGTCGCGGA GTTAGATCGA GCAAAGATCC TCTCTTATGT TAACCAGCTG TCTACCCGCA CACGATCTCC TAAGCTGATT TCCGGTATTG TTTCCCATTA CTTCTCGCTA CCGAGTGTAC GAATCGAAGA GTGGGTGTAT CGACGAGTAG ACATTGCAGA AAGTCAACGC AACAAGCTTA ACCGTGCCAA CTGTGTATTA GGGCAGACCT TACATTTGGG GCAAAGTATT GCGGATTTGA ACGGCAAATT TAACTTGTGC ATCGACAACA TTGATTTTGA GACGTTTAGG CAATTTTCCT ACGATGGCGA GCTGCACAAG ACGCTGGTGG GATTGATGCG TTTTATTCTA CGTGACCCGA TGTCTTGGGA CCTTAAGCTA ACTGTGAATC TCGATTCTAT CCCAGAGAAT CAGCTGGGTA ATGGGGAAGG GAATCAGTTG GGTCAAACCT TTTGGCTTGG TAACCCAGGT GAGAAAGATG CCAAGATACG TTTGATTGGT AGCATATAG
|
Protein sequence | MITTLTDKSY EFSFYQAVLL LEKHYQLEPN SNFVAVGENK YFHQERIEFS VSPSMAFPKS DMEFITHMER NGQQYSRVET NFLGLHGSSS PLPASYTEKL AGRDPDDNPV KDFFDFFHNR YTSLLYRVWK KYRYHVQYQS GASDAFSGRI LHLAGLSDVM QDCDVAELDR AKILSYVNQL STRTRSPKLI SGIVSHYFSL PSVRIEEWVY RRVDIAESQR NKLNRANCVL GQTLHLGQSI ADLNGKFNLC IDNIDFETFR QFSYDGELHK TLVGLMRFIL RDPMSWDLKL TVNLDSIPEN QLGNGEGNQL GQTFWLGNPG EKDAKIRLIG SI
|
| |