| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05857 |
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| Symbol | |
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| ID | 5557757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 1042372 |
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| End bp | 1045761 |
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| Gene Length | 3390 bp |
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| Protein Length | 1129 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640910331 |
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| Product | hypothetical protein |
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| Protein accession | YP_001447978 |
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| Protein GI | 156977072 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAAC AAAAAATACT AAGAAACCCG ATTTTGGTTT CTACCATAGT GGCTTTGCTA
TTAGCCGCGA TATTTGCAGC AGTGTATTTA TTCTTACTTG AAGATGCAGA TAAGCTATAT
CTATGGATTG GCCTTGGCGT CATTTCTGCA TTTTATCTTA TATTCCAGTT GTCACTATGG
TTTAAGAAAA AGAACAACTC GAAAGCCCAA CGTTTGGAAA CCGAGGAAGA AGCCCTTTCT
ATGGTTATCC GCCCTCTTCT TTCTCATTCA GGCAAGAAAC CAATCTACCT AATGATTGGT
AATAAGGGGT CTGGCCGACG TCAATTTTTG TTTAATTCAA GCGCAATTAA ACCAATGGAT
CGTTCTCGCA CTGCAAAAAA CGATTTCTTT GAATGGTATG AATCTGACGG TGCGGTTTAT
GTAAAACCAG ACCAACGCCT CGTATTCCAA GAAGTATCCA GTAGTGATGC TTCATTGTGG
AACACGTTTG TTGATGAGGT TATTCGTCAC CGTCCAAGAA AACCGTTTTC TGGCTGTTTA
TTTTTTACTG ACTTTGAGTT CATGATCGTC TCAGAACCAG AGCAAAAAGA TTACACCATT
ACCGCACTAT TGCAGCGCCT AAGTTCTATT AGCGAAAAAA CATCATCGGC ACTACCAGTT
TATTTGATGA TGTCTAAGCT TGATAAGTTG GACGGTTTCA AAGAGTACGT ACATTTCAGT
TCTCTGAAAA CTCGTGTGGA ATTCCTTTCT ATTCCTCTTA AAGAAGCGAA AGGCGTCATC
ACTGAATACT ACCGAGATGG TTACCGTAAT CTGGTGAAAG TACTGGAAAG CAATGCTCTG
GACGCTTCTG CAAATTCGAC AGACATCGAT GAAAAACAAG CTATTCTGTC ATTCCCGAAA
CAGTTCGAGC TTTGCCAAGC AGAAATCAGT TACGTCCTTG AGCGTCTTTG CGATGTGAAC
AGCGGCACTT ATTCGCTCGA CATTCGTGAG ATCTTTTTCT GCTCTAGCTT ACAAGGTGGT
CGTAAGTACA ACCTGTTAGC AAAAAGCTGC AGCAATTACT TTAATTTGCC GATCATTGCT
TCAGAGCACA CACAGCTGAC AGAAACGCCT TACTTCTCTC GCTTCCTGAT TGACTCTCAG
ATTTTGCCTG AGAGCGATTT TGCGGGTGAA AACAAAACGT ATTTACGCTT AATCCAACGT
CAAAGTCATT TGGCCATGTT AGCGTCCGTG ATCTTGTTGG CTGGCGGTAC CTACTTCTTT
GTTACCACAC TAGACAGTAA CTTGCGTGTG ATTAACCAAT TGCTTGGTAT TGATGACAAC
GGTCAGGTTG AACAAGAAGC AAGCTTCAAT CAGCTTCTCG TAAACGCCAC TCGCGCTATT
CAACCTTCGT ACAGTGCATG GCTAGAAGGC TCTCGAGCTC TAGATGAAGA AGTGCTTCCA
CTGAACATTA GCCGCTTGGA CCAAAGCACA CGTCTGGCTT ACGAAGCACT GCTTAAAGAA
GTGGCACAAC AGCTTATGCC CGTCGTTGAA AAAGGCTACC GTCTAGAGTT GACGCATAAC
CAACATGACG TTGCCGCGAC ACTGCCATTG CTAAAAGGCT ACTTGATGCT GAACGATCGC
TCAAAGCGTG ACATTCAGTT CCTACGTCGC CAGACCTTGC AAACCCTTAA TGATTTAAGC
GATAAGCCGG ATGTAGTAAA CCAGGCAATG CGCTATTTAG ACGCTTATTT CCGTACTCAG
TTTGCGCCTG TTGATATCAA TATGGACATT GTTCGTGCCA CTCGCCGTTC TTTACTGGCG
AACTCTAACG TCGACCTTGT TTATGCGGGT ATTTTGAATC AAGCCGATGC TATCGACCTT
GGTACGCTAG ATCTTCAACG CGCTGTTGGC TTTGAGTTCA ACAACGTGTT TAATGAACCG
CTAGACGACA ACCGCTTAGT GATTGACAAA GTCTACACGT CTACTGGCTT TAGCACCTTC
TATCGCCCTC GTGTGGACCT GATGTCACAG CAAGTTATCA GCGATAACTG GGTTCTTGGC
TTGTCTAATC ACGTGATCCC TACGAAACAA GAGCAGGATG CGTTTAAGAC ACAGGTACGT
AAGAAATACA CCGATGACTA CATCAACTAC TGGCGTAATG CACTGAGTGA ACTGAGAGTA
CAGCATTACA GCAATGTGGG CGACTTGACG AATGCAATCG ACCTTATTTC TGGTCCGTCT
TCTCCAATGA CGACTGTATT AAAACAAGTG TACGCGAACA CCCAGTTTTC TCCGGTTGGT
GAAAAGAATG CATTAATTGC CAATGTAAAC CCTAAGCTAG CGGAAGTTGC AGATACGGCC
TCAGAAGCAG TAGAAGAAGC CGTACAGCCA GATTACTTAC TGATGAAGCG TGTTGAGCAA
GCCTTCCACT TGTTAAACCA ACTTCAAGTC AGTGAGACAC CTAACTCCCC GACTCCATGG
GATGAAACCA TTGCAGCATT AAGCCGTGTT CGTACTTACA TGAAAGACAT CGCTGATGCA
CCAGATCCAC AAATGGCCGC ACTTGCAGCA GCGCAACACC GCATGAACAG TACAGAAGCG
GATCCGCTTA TCAAACTGAA GCAGATCGCG CAGAAGTCTC CAGAGCCAGT GCGTAACTGG
TTACTTGATG TGGTACAGCA AAGCTGGTCA GTGATGATTG CTGAGTCCGC AAAAGGCATT
CAAACCCAAT GGTACAGCGA GATTTACACC AAGTTTAAAG AGCTAGGGCT TGGTAAATAC
CCATTTGATC TGAACGCGAC AGAAGAGATT TCAATTGAAG ACTTCGAGCT GTTGTTCGCA
TCAGGTGGTT TGTTAGATAC GTTTATTCAG AAGAACTTCG CACCGTTCTA CGATACAAAC
TTGTGGACAC CAAAGCAGGT GGATGGCGAG ACAATGCCTC TTTCGCCTGC CCTATTGGTG
CAATTGCGCA ATTACAACGT TATCCGCGAT ACGTTGATCA ACAAGAGCAC AAACCGAGTT
TATATCCCGT TCAGCGCGAA AGTATTAGAC CTTGATTCCA GTGCTATCCG AGCCACTCTG
AAAATTTCAG ACACGGATAT CAACTACTAT CATGGTCCGA GCCGAATTCG TGAGATGGAG
TGGCCGCCGC AGAACGGTGA CTTCAACATT AGTATCACGA TCCAAGATGT GACAGACGAG
GGCAAGCAGC ACGTTCTTAA TAAGAGTGGT CAGTGGGCGA TATACAGATT GCTAGGTGAT
TCGACCCTGA CAAACACTCA TAACGGTAGC TTCGTCAGTG ACATAAAAGT GTCTGGAAGG
GACTTAAGCC TTCGTATCAC TCCTTTGACA CAGAAAAACC CCTTCACTCT TGCTGAGCTG
TATAACTTTA CACTCCCTGA GTCGATTTAA
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| Protein sequence | MFKQKILRNP ILVSTIVALL LAAIFAAVYL FLLEDADKLY LWIGLGVISA FYLIFQLSLW
FKKKNNSKAQ RLETEEEALS MVIRPLLSHS GKKPIYLMIG NKGSGRRQFL FNSSAIKPMD
RSRTAKNDFF EWYESDGAVY VKPDQRLVFQ EVSSSDASLW NTFVDEVIRH RPRKPFSGCL
FFTDFEFMIV SEPEQKDYTI TALLQRLSSI SEKTSSALPV YLMMSKLDKL DGFKEYVHFS
SLKTRVEFLS IPLKEAKGVI TEYYRDGYRN LVKVLESNAL DASANSTDID EKQAILSFPK
QFELCQAEIS YVLERLCDVN SGTYSLDIRE IFFCSSLQGG RKYNLLAKSC SNYFNLPIIA
SEHTQLTETP YFSRFLIDSQ ILPESDFAGE NKTYLRLIQR QSHLAMLASV ILLAGGTYFF
VTTLDSNLRV INQLLGIDDN GQVEQEASFN QLLVNATRAI QPSYSAWLEG SRALDEEVLP
LNISRLDQST RLAYEALLKE VAQQLMPVVE KGYRLELTHN QHDVAATLPL LKGYLMLNDR
SKRDIQFLRR QTLQTLNDLS DKPDVVNQAM RYLDAYFRTQ FAPVDINMDI VRATRRSLLA
NSNVDLVYAG ILNQADAIDL GTLDLQRAVG FEFNNVFNEP LDDNRLVIDK VYTSTGFSTF
YRPRVDLMSQ QVISDNWVLG LSNHVIPTKQ EQDAFKTQVR KKYTDDYINY WRNALSELRV
QHYSNVGDLT NAIDLISGPS SPMTTVLKQV YANTQFSPVG EKNALIANVN PKLAEVADTA
SEAVEEAVQP DYLLMKRVEQ AFHLLNQLQV SETPNSPTPW DETIAALSRV RTYMKDIADA
PDPQMAALAA AQHRMNSTEA DPLIKLKQIA QKSPEPVRNW LLDVVQQSWS VMIAESAKGI
QTQWYSEIYT KFKELGLGKY PFDLNATEEI SIEDFELLFA SGGLLDTFIQ KNFAPFYDTN
LWTPKQVDGE TMPLSPALLV QLRNYNVIRD TLINKSTNRV YIPFSAKVLD LDSSAIRATL
KISDTDINYY HGPSRIREME WPPQNGDFNI SITIQDVTDE GKQHVLNKSG QWAIYRLLGD
STLTNTHNGS FVSDIKVSGR DLSLRITPLT QKNPFTLAEL YNFTLPESI
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