| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05852 |
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| Symbol | |
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| ID | 5557218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 1036464 |
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| End bp | 1037789 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640910326 |
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| Product | hypothetical protein |
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| Protein accession | YP_001447973 |
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| Protein GI | 156977067 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTAT ACAATCCAGT TGTTTGGCAA GATGGAATGT TCATGAAGCC GCAGCACTTT
CAGCAACTCG ATCGTTCGCA AAGTAAACTG TCGAGCATGC TGAGCGCCAA TGCGTCGCCT
CTACATTGGG GAATTAAGCG TTTAGAGATC AACTCGCAAC TGCTGGCGTT GGGCAAAATT
GGTATTACTC GTGCTGAAGG TATTCTTCAA GACAGAACGC CATTCGAGTT GCCGCTGCTA
GCTGAACTTC CAGAAGTGAA AGACGTTGAT CCTTCGATTG CTGACAAGGT GGTTTACCTT
TGTTGTCCGC TACCTTCTGA GCGCTCTGAG CTATTCGGCA CTAAGAAAGA CGGCGCACGT
TACACGATGG AATCTCAAGA GGCGGTTGAC GCTTGTTATG ATTCGGAAGA TATGGCAAAC
ATCGTAGTCG GTAAGCTTAA CTTCTGTTTG ATGTATGACC ATGAAGATAA GAGTGCTTAC
ACATCGATTC CAATTCTAAA GATCTCAGAA GTAAAGCCAG ACGGCAGTGT CATCTTAGAT
GAGAGCTTTA TCCCGACTTG TATTGATATC CACGCTTCGA CCGTACTGAA CAAGTTCGCC
ACCGAATTCG CATCTATGCT GAAACACCGT GCAGAATCTA TCGTTCAGCG CTTAGGCGTG
GTTGACCAGC AAGGCGTATC TTCGGTTTCT GATTTCATGC TGCTACAAGC CCTAAACCGA
TACGAGCCGC TATTCTGGCA CTTTGCAAGC GCTGAAGGGG TTCATCCTGA GTCGTTTTAT
CGCATTCTTC TTCAGGCGGA AGGTGAGCTT TCGACTTTGT GTTCAGCGTC TCGTCGTCCA
GTCGAGTTCA CCAAATACAA CCATGGCGAC CTAACCAGCT GTCTATCGCG TACATTGGAT
AGTGCGAAGA TGACACTAAG TGTGATGTCT GAGCAACGTG CAATCCCTCT GACGTTGAGA
GACCAAAACT ACGGCATTAG AACGGCAGCG ATTCCAGACA GCAAGATCAT CGATACCACA
ACCTTTATTC TTGCGGTTAA AGCTGATGTT ACTTTGGATG TTCTACATAC TCAGTTTGTT
AGCCAAACGA AGATCGGTTC TATCGATAAC ATTCGTGACT TGATTAACCT TCAACTGCCG
GGCATCGAGA TCAAACCAAT GCCAGTTGTA CCTCGAGCAT TGCCTTACCA CGCAGGTTAC
ACCTACTTCG AACTGGATAA GACAGGCGAA GAGTGGGCGG CACTGAAAAA CACGGCTGCG
ATAGCGGTTC ACGTAGCCGG CGACTTTGCT AACTTGTCAT TGCAACTATG GGCTGTTCGT
CTATGA
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| Protein sequence | MSLYNPVVWQ DGMFMKPQHF QQLDRSQSKL SSMLSANASP LHWGIKRLEI NSQLLALGKI
GITRAEGILQ DRTPFELPLL AELPEVKDVD PSIADKVVYL CCPLPSERSE LFGTKKDGAR
YTMESQEAVD ACYDSEDMAN IVVGKLNFCL MYDHEDKSAY TSIPILKISE VKPDGSVILD
ESFIPTCIDI HASTVLNKFA TEFASMLKHR AESIVQRLGV VDQQGVSSVS DFMLLQALNR
YEPLFWHFAS AEGVHPESFY RILLQAEGEL STLCSASRRP VEFTKYNHGD LTSCLSRTLD
SAKMTLSVMS EQRAIPLTLR DQNYGIRTAA IPDSKIIDTT TFILAVKADV TLDVLHTQFV
SQTKIGSIDN IRDLINLQLP GIEIKPMPVV PRALPYHAGY TYFELDKTGE EWAALKNTAA
IAVHVAGDFA NLSLQLWAVR L
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