Gene VIBHAR_05845 details

Gene Information

• Locus tag: VIBHAR_05845
• ID: 5556909
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: -
• Start bp: 1028733
• End bp: 1030649
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640910319
• Product: hypothetical protein
• Protein accession: YP_001447966
• Protein GI: 156977060
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCGTT CTCGTCTTGC TCGCTTACCT CTGCGTCATA AGATGATGTT GCCGACTTGG 
TTAATGATCA CGTTGATTGT TATTGGCTTG GGGACTTTAG CTATTCAATA TTTGGTGTTG 
GCGCAAGAAG CTGCACTTGA TCGAAGAACC AATATTCTTG GACAGGGCGT TGCCAATACG 
CTTCAAGCGG CGTTGATGTT TGATGATGCA TACGCAGCAA AAGAACAATT GGTTAATTTG 
AGCTTTGACC CTGACGTTAT TTCTGCCCTT GTTATCAATC AAAATGACCA AACCATGGCT 
TCGATTGAGG ATTTGCCTGT TGGTTGTGAA TGGCAGAAAC GAACATTGGA GTGTACTCAC 
CTAAGTGTTG TGATGCGTCA TTATGATGTT GTGTTAGGTG ATGAAAAGCT GGGTGCATTA 
GAAGTTTGGG TGTCACTGGA GAACCTACTC ATCAATGAAC GAAAGATGTG GCTCTCATTA 
GCCGTGATCG TTTTGTTACT TTCCATGTGT GCGTGGGCAT TAGCTAAATT GCTGCATTCA 
TTGATCTCAT TGCCTTTGTT GTCACTGCAT CGTTCGGTTG AACACATGAG TCGGGTTGGC 
GTGATTCGAA AAACACTCCC GGTTTATCAC CAAGATGAAG TTGGTAAGCT CACGGCATGC 
TTTAATGAGA TGACCATGAG CTTGGCTGAG CGTGAGTCTC AAGTAGCACA GGTTTTGAAG 
CGAGTAGAGG ACAAAAACCG CTATATTCAC AGCGCATTAG ATGCGATGCA GCGTTGCGTG 
CTCGTTGTTT CTTCTTACCA TAAAGTCACG TACTTCAACC CGGTCGCCTC GAAAGAGATG 
AAAGGGGTCG ACGTCAATTC GGATGTTCGT ACGTTGCTCA CGAGTTGGTT TGAGCCTGTA 
TCTAAAATCG AACGAATCAT GTTTGCGATA GATACGCACA CCACGGTAAA GGGAATAGAG 
GTTCGTAGCT TAGATAAAAC CAAGCGTTAT TTGATTTCTT GCAATCCGAT GGATACAGAA 
AAAAGCAGCT TGATCCAGTT GCAGGACATC ACAGAGCAAA CCTTGTCTGA GCAGCGCCGT 
AAGTTACTTG ATTTGATGTT TGACCAAAAC CAAGATGCCA TTTTAGTGTT AAACCGAGCA 
CTGAGTATCC AAACCCAAAA CCATGCTGCG ACACAATGGT TTGGTGAGGT GGGGGCGTTA 
AGGACGTTAG AGCTTTTATC ACCGTTTGAA GTGACTAAGG CAATTAAGCT TCGATTGCTC 
AAAACAGGAC ACTACAAGAC GCACGTTGAG CTGAAAAACC AACAAGGACG GGTTATGCCT 
TGTGAGTTGA AAGTGCGAGT GTTGAAGAGT GAAACTGGCA GAGCGGAAGC GTTCGTGGTT 
TCATTTACGG ATTTAACCAT AGATATCGAG CTCAAGCGTC TGAATTATCA AGCGAATCAC 
GACCCATTAA CGGGTTTGGC TAACCGCTCA AAAGCGATGC GTCGTTTACA AGAGAAGCAC 
GATTTGGGGA CATCACAACA TATTCTGTTT GTTGATTTGG ATGGCTTTAA AGCCGTAAAC 
GACCAATATG GGCACGCGAT TGGTGACCAA CTATTGAAAG TTGTCGCACA ACGTTTGATG 
AGTTGTGTGG CAAGGCGAGA CTTGGTGTCA CGTTTGGCGG GTGATGAGTT TTTGATTGCG 
GTTCGTGAAG CGACAAGCTG TGAGCCGATT GCTCAAAGGA TCATCGAGAG TCTATCCAAA 
CCGTTTCTCT TTGGTGATAT AACGTGTGGC ATCTCTGCAA GCATCGGCGT GAGTTATTGG 
CCACGCGATG AAAATACTTC CCTTGAAGAA AAAATCAACG AGGCGGACAT GGCGATGTAT 
TTCGCCAAAA AAGAAGGAAA GAACCAGTTT CGTTCAGGTT TAGAAACGGT TTACTAA 

 

Protein sequence

MIRSRLARLP LRHKMMLPTW LMITLIVIGL GTLAIQYLVL AQEAALDRRT NILGQGVANT 
LQAALMFDDA YAAKEQLVNL SFDPDVISAL VINQNDQTMA SIEDLPVGCE WQKRTLECTH 
LSVVMRHYDV VLGDEKLGAL EVWVSLENLL INERKMWLSL AVIVLLLSMC AWALAKLLHS 
LISLPLLSLH RSVEHMSRVG VIRKTLPVYH QDEVGKLTAC FNEMTMSLAE RESQVAQVLK 
RVEDKNRYIH SALDAMQRCV LVVSSYHKVT YFNPVASKEM KGVDVNSDVR TLLTSWFEPV 
SKIERIMFAI DTHTTVKGIE VRSLDKTKRY LISCNPMDTE KSSLIQLQDI TEQTLSEQRR 
KLLDLMFDQN QDAILVLNRA LSIQTQNHAA TQWFGEVGAL RTLELLSPFE VTKAIKLRLL 
KTGHYKTHVE LKNQQGRVMP CELKVRVLKS ETGRAEAFVV SFTDLTIDIE LKRLNYQANH 
DPLTGLANRS KAMRRLQEKH DLGTSQHILF VDLDGFKAVN DQYGHAIGDQ LLKVVAQRLM 
SCVARRDLVS RLAGDEFLIA VREATSCEPI AQRIIESLSK PFLFGDITCG ISASIGVSYW 
PRDENTSLEE KINEADMAMY FAKKEGKNQF RSGLETVY