Gene VIBHAR_05804 details

Gene Information

• Locus tag: VIBHAR_05804
• ID: 5556913
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 992103
• End bp: 994013
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640910278
• Product: diguanylate cyclase/phosphodiesterase
• Protein accession: YP_001447925
• Protein GI: 156977019
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain; [COG2200] FOG: EAL domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTACAT TACAAACACT AGATTACGAG ATACCCGAAT CGATGCGGAG AAGTTGGCAA 
AATATCGTCA ACCTCTTAGC ACGCATTGCC GATGTACCCA CTACACTGAT CATGCGCATA 
CATCCCGATT ACATAGAAGT AAACACCACT AGCGAAACCG AAAATAACCC TTACCAAGTT 
GGCGACAAAG AAAAACTAGG ACACGGTCTT TACTGTGAAC ACGTTATCGA AAACAAATGT 
GGGCTGTTGA TCCCTAATGC ACTGATTGAC GAGAATTGGA AAGATAACCC GGACATCAAG 
CTCGGAATGA TCTCTTATTG CGGGCTGCCG CTGTATTGGC CGAACGGAGA AACCTTCGGC 
ACTATCTGCA TGTTGGATGC GAAAGAAAAC CAGTACAACG ACACCTACAG AGAGCTTCTT 
TCCTCTTTCA AAGAGTCTAT CGAAGCTCAG CTTGCCGTCG TTTTTCAACA ACATAAGCTT 
GTCCGCTTGA ATAACGAACT TAAAAACCGA GTTGAAACCC GCACTACTGA CCTTGCACAG 
CTTAGTTACT CGTTGACAAG AGAGATAGAC CGCCGTAAAG CCGCCGAAAA GCAAGTCAGT 
TATCAGCAGA CTCATGATCA AGGGACAGGC TTTTTGAATC GAGCAGCACT CGAACAAGTG 
TTAGACCAAA CCTTAGATGG CATTGATACT GAACAACACT CTTTGGTGGT GATTAATGTC 
GGCTTTAGCA ACGCTCGAAG CATACAAACG AAATACGGCT TCGAAGCCTT TGACGAGGTA 
TTGAAAGAGT TTCGCTTTCG CCTTGGCCAC ACCGAATCCA GCTATTTTGT CACAGGAAGA 
CCAAGCTCTA ACGACGTCGT TATCATCGTT ACCGGCGAAA ACATAGAAAC GAAAGTACAG 
CACCTCCTCG ACGACATTAA TCATGTCAGT TTGGGTAATT TTTTTATTGA GGACAACGAA 
GTCCACCTCA ATTCTTATGT GGGTGTAGTT CAAGCCCACA AAAACAGTTA TGGGAAGCAA 
CTACTGCAAA ATGCGTGTTA TGCAATGTTG CTGTGTAAAG AGTCGGGCGA ATCTTATCGC 
TACCTCTGTG AAAGTCAGTC TCAAGATATT AGTGACCATA ACAAACTCGA GAGCTACTTG 
CTGCAAGCGG TTCGTAACGA TGACTTAATG CTGTACTACC AACCGAAGGT TCTTCCACAT 
AACCATAAAT GGATTGGCGC TGAGGCATTA CTTCGTTGGC GCCATCCGGT GCTGGGCGAT 
GTCTCTAATG AAGCCCTAAT TCACATGGCC GAGCAAAATG GTCTGATCTT TGAGGTCGGT 
TCGTTTGTCC TTCGCACTGC AATAGATAAA GCTAAGCAAT GGTCTGAGCT GGTGGATAAC 
TTTAAGATTG CCGTGAATGT CTCACCTATC CAATTGCAAA ACGTTAACTT CGCAGAGCAA 
ATTGAACACC TATTAGATAC CTTTCACCTA CCCGCGCACT TCCTCGAGCT GGAAGTCACC 
GAGAGCGCGC TCATTGCTGA TGAGGTTGTT GCACGTAATA CATTGAATAA ACTACACGAA 
CTTGGTGTGA CATTGTCACT CGATGACTTC GGGACGGGTT ATGCCTCTTT CAGTTATTTG 
AAAAAATACC CGTTTGATGC GATTAAAGTT GATAAAAGCT TTGTTCAGCA AATGGAAAAA 
TCTGACGACG ACAAAGCCAT CATCTGTTCT ATCATCCACA TCGCCAAAAA ACTGGAACTT 
CAAGTGGTCA TTGAAGGGAT TGAGTCCACT CAACAAGAGC AATTTTTGAT TGGTGAAGGC 
TGCGATATTG GACAAGGCTT TTTGTACGGT AAGCCAATGC CTTGCAATGA ATTTGAACAA 
AGTTTGTTTA ATCAAAACCT ATTAGGTGGA CAATACACCT ATTCTTCCTA A 

 

Protein sequence

MGTLQTLDYE IPESMRRSWQ NIVNLLARIA DVPTTLIMRI HPDYIEVNTT SETENNPYQV 
GDKEKLGHGL YCEHVIENKC GLLIPNALID ENWKDNPDIK LGMISYCGLP LYWPNGETFG 
TICMLDAKEN QYNDTYRELL SSFKESIEAQ LAVVFQQHKL VRLNNELKNR VETRTTDLAQ 
LSYSLTREID RRKAAEKQVS YQQTHDQGTG FLNRAALEQV LDQTLDGIDT EQHSLVVINV 
GFSNARSIQT KYGFEAFDEV LKEFRFRLGH TESSYFVTGR PSSNDVVIIV TGENIETKVQ 
HLLDDINHVS LGNFFIEDNE VHLNSYVGVV QAHKNSYGKQ LLQNACYAML LCKESGESYR 
YLCESQSQDI SDHNKLESYL LQAVRNDDLM LYYQPKVLPH NHKWIGAEAL LRWRHPVLGD 
VSNEALIHMA EQNGLIFEVG SFVLRTAIDK AKQWSELVDN FKIAVNVSPI QLQNVNFAEQ 
IEHLLDTFHL PAHFLELEVT ESALIADEVV ARNTLNKLHE LGVTLSLDDF GTGYASFSYL 
KKYPFDAIKV DKSFVQQMEK SDDDKAIICS IIHIAKKLEL QVVIEGIEST QQEQFLIGEG 
CDIGQGFLYG KPMPCNEFEQ SLFNQNLLGG QYTYSS