| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05800 |
|---|
| Symbol | |
|---|
| ID | 5556935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009784 |
|---|
| Strand | - |
|---|
| Start bp | 986864 |
|---|
| End bp | 989320 |
|---|
| Gene Length | 2457 bp |
|---|
| Protein Length | 818 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640910274 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001447921 |
|---|
| Protein GI | 156977015 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTGA TCTCTTCTAG TGAACAAGAC TCGGCGCCAA GCAACCAAAA GGCGAAGCAT
TCCCCGAACA AGAGCCTAGT GCGTTGGAGC TTGGGGGAAA TACGTCAAGG GAACCTGTGG
CCGATCAGCG TCGCATTGAT TTTGGTGATT GCCAGCATCT TCGCGCTCTC TGCTTTGGCC
GAGCGAATGG AGCAGGTCAT TGTAAAACAG GGCAAAGATG CATTAACCGC CGATGCTGTA
TTTGTTTCCG CTAACCCCAT TCCTGATGCA CTTATTGCTG CGACAGATAA ACTAGAACGC
TCAACCATGA CGCGCTTTGC GACGATGGCA TTCAGCGAGA CAGGGATGCA GCTTATTTCC
GTTCGAGCCG TTGATGAGCA ATACCCATTG ATGGGCGATC TGGTTCTCGA CAGCAATTCG
TCAGGCCATG TGAAGGCAAA CCAACTTTGG CTAGACGAGC GCATTATGGC GCAGTTGGAT
GTGAAAAAAG GTGACATTGT CACCATTGGC GATGCTGATT TCACGGTCTC TGGTGCTGTG
TTGATGGAAC CAGGACTGAG TTTCAACCCT TTCCAACAAA TGCCCTCGGC GTATATTCAC
CAAAGTGACG TTGAGAAAAC GGGCGCCATT CAGGTCGGGA GCCGCGTTCA ATATCGCCTG
TTCCTCAAAG GTGATGATAC AACGCTGACT CAACTTCAAG ACAGCACTGA ACTCTCTCCG
AGTGATCGCT GGCGCACGCA AGATACGGCA AGTCGCAGTA ATGAAGTGTT CGAGCGCACA
ACTCAATATC TTTCGTTAAC AGTTGCGATC GTCATCATCA TGGCGGCAAC GACGTTGGTT
TTGACTTGCC AAAGTTACGT AAACAGCCGA ACTCAAACCA TCGCGATGCT GAAGAGCTTG
GGAGCAAGTC GTCGTTGGAT TGAAAAATGG CTACTGATTC AAGTCACTAT CTTGCTGGTG
AGTGCGAGCA TCGTTGGTCT TTTATTAGGT AGCGGCTTGG AATATTTGTT GCGAATTCCA
CTCAAAGATC TTCTCCCAAA CCCACTTCCT AGTTACGGCG TCACTCCGGT TTTAATCTCT
GTTGTTTCAG CTGTTCTTAT TACGGTACCA GCGCTTGGTA TTCCTCTGCT CGGTCTAATA
AAAACGCCTG CGTTAGAAGT GCTACAGCAA GGTTCTCGTA AGCGTTCTTG GAAGCGCATG
TGGCTAGTTC TGGTCCCTGT AGTGCCATTG CTGATCCTAT ACGCGAATAA CACGTTAGTG
TGGATTGTGC TTGCAGGCAT TGCAGCCTTG TTTGTTGTAC TTGCCGTCGT GAGTGTCATG
CTTACCAAGT TGTTCGCTCA TATATCGACA AAGCCCGCGA TGAAGCTCGC CTTAAGTCGA
ATTAACCGAA CCCCAGTGAC GAGTGGCTTG CAGTTTGGCG CCTTATCTCT GTCATTAATG
TTGCTCTCTA TTATTTGGCT TGTACGCAGC GATATCCTTG CTGATTGGGC GAGGACGCTG
CCAGCGGATG CCCCCAACGT TTTCGCATTG AATATTGCAG ACTATGAGCT CGATAGCTAC
CTTGAGACAT TGGATAAAAA TGGCGTGACA AGGTCACAGG CCTTCCCAAT TATTCGTGGT
CGACTTGCGG AAATTAACGA TGTGAGTGTC AAAGAGATAA AATCTCAAGG TCAAGGTTCT
GATGCAGTAA GCCGAGAGTT AAACCTAACA TGGGGGGATG CGTTGCCAGA ATACAACGAA
ATCCTGTCCG GCTCTTGGAC GAACAAAGCA AGCGTTTCTG TCGAAGCACA AGTTGCGGAC
GAACTTGGTA TTGATCTGGG TGACAAACTG CGTTTTGTGA TTAACAGTCA GAACTTCGAT
GCTACCGTCG ACAGCATTCG TCATGTCGAG TGGCGAGATA TGAAGCCAAA CTTTTACTTC
ATCTTCTCTT CAGATGTTAT GGCCAGCTTG CCGGGTTCTT ATTTGATCAG CTATCGAATC
GACGATGGTA ACGACGCTCT GCTGACTTCA ATGTCTCGGG CTCATCCTAC GGTATCAGTA
CTCGATATTC GAACCATGGG CGACAAAATC CAACAACTTA TCCAACAGAT AGTATCAGCG
ATTACCATTC TGGCGCTTCT CGGTGTCGTC GCGGGTTTGT TGTTAATATT TACACTATTA
CGTTTGAGCT TATCTCAGCG TCAGGAAGAG ATTCGACTCT ATCGAACCCT CGGTTCCAGT
AAGAAACGTA TCAACACAAC GCTGTGGGCT GAATATGGGA TTATGGCGCT TGTCGCGAGT
GGTGTTGCAG TCTTTGCCGC AGAAGCGTGT GTGGCAGCAG TAATGAAGTA TGGTTTCCAA
CTTAGTCCAC AGATTCACCC TGAATTGTGG ATAGCTTTAC CAGTAGCCAC GTTCTCCGTG
TTAGCACTCG TAGTAATGAG TCTAATAAAA AGATTGTTAA CACCGGTAAA CACTTAG
|
|---|
| Protein sequence | MSVISSSEQD SAPSNQKAKH SPNKSLVRWS LGEIRQGNLW PISVALILVI ASIFALSALA
ERMEQVIVKQ GKDALTADAV FVSANPIPDA LIAATDKLER STMTRFATMA FSETGMQLIS
VRAVDEQYPL MGDLVLDSNS SGHVKANQLW LDERIMAQLD VKKGDIVTIG DADFTVSGAV
LMEPGLSFNP FQQMPSAYIH QSDVEKTGAI QVGSRVQYRL FLKGDDTTLT QLQDSTELSP
SDRWRTQDTA SRSNEVFERT TQYLSLTVAI VIIMAATTLV LTCQSYVNSR TQTIAMLKSL
GASRRWIEKW LLIQVTILLV SASIVGLLLG SGLEYLLRIP LKDLLPNPLP SYGVTPVLIS
VVSAVLITVP ALGIPLLGLI KTPALEVLQQ GSRKRSWKRM WLVLVPVVPL LILYANNTLV
WIVLAGIAAL FVVLAVVSVM LTKLFAHIST KPAMKLALSR INRTPVTSGL QFGALSLSLM
LLSIIWLVRS DILADWARTL PADAPNVFAL NIADYELDSY LETLDKNGVT RSQAFPIIRG
RLAEINDVSV KEIKSQGQGS DAVSRELNLT WGDALPEYNE ILSGSWTNKA SVSVEAQVAD
ELGIDLGDKL RFVINSQNFD ATVDSIRHVE WRDMKPNFYF IFSSDVMASL PGSYLISYRI
DDGNDALLTS MSRAHPTVSV LDIRTMGDKI QQLIQQIVSA ITILALLGVV AGLLLIFTLL
RLSLSQRQEE IRLYRTLGSS KKRINTTLWA EYGIMALVAS GVAVFAAEAC VAAVMKYGFQ
LSPQIHPELW IALPVATFSV LALVVMSLIK RLLTPVNT
|
|---|
| |