Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05795 |
Symbol | |
ID | 5557323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 982649 |
End bp | 983404 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640910269 |
Product | LamB/YcsF family protein |
Protein accession | YP_001447916 |
Protein GI | 156977010 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTGA ATAATCAGCA ACTGACACTA AATTGCGACA TGGGTGAAAG CTTTGGCGCA TGGAAAATGG GCGCAGATGA GTGCGTGATG CCTTTTGTCG ATATGGCAAA CATCGCTTGT GGTTTTCATG CTTCTGACCC AAATGTCATG CACGATACAA TTACCCTTGC CAACCAACAC GATGTAGAAA TCGGCGCTCA CCCAGGCTAC CCGGACCTAC AAGGTTTTGG GCGTCGCAGC ATAAAAATGA CCAACGACGA AATCACTAAT ATGGTGATTT ACCAAGTCGG AGCTCTGCAA GCTTTGTGCA AAGCGCAATA CACAGACATT GGCTATATCA AACCTCATGG TGCGCTGTAC AACGATATGA TGCAAAGTGA TGGCGTTTTT CTTGCTGTCG TCAAAGCTGT GGCGCTGTTT AAAGTGCCGT TGATGATTTT AGCCTCCAAA GAAAACGAAA AGTATCTCGA AATTGCTGAC GATTTCGATG TGCCATTGCT GTTTGAAGCC TTTGCCGATC GTCTCTATCA AGATGATGGA ATGCTCACAC CAAGAACGCA GCCTAATGCA GTATTAAACA GCGAACATGC CATTTTAGAA CAAGTAAGAA TGCTGGCAGA GTCTGGTCGG GTAAAAACCG CTTCTGGTCA ATACATTCTT CTAGAAGCCG ACACAATTTG TGTCCATGGG GATAACAACG AATCCATCGC TCTCGTTCAA AAGATTCGTC AAAGTCTCTA CACCGGAGGA AATTAA
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Protein sequence | MTLNNQQLTL NCDMGESFGA WKMGADECVM PFVDMANIAC GFHASDPNVM HDTITLANQH DVEIGAHPGY PDLQGFGRRS IKMTNDEITN MVIYQVGALQ ALCKAQYTDI GYIKPHGALY NDMMQSDGVF LAVVKAVALF KVPLMILASK ENEKYLEIAD DFDVPLLFEA FADRLYQDDG MLTPRTQPNA VLNSEHAILE QVRMLAESGR VKTASGQYIL LEADTICVHG DNNESIALVQ KIRQSLYTGG N
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