| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05794 |
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| Symbol | |
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| ID | 5557214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | - |
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| Start bp | 980404 |
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| End bp | 982362 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640910268 |
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| Product | hypothetical protein |
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| Protein accession | YP_001447915 |
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| Protein GI | 156977009 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTAC GAGCAAAGCT AATATGGCCG ATTCTCGCTT TCATCACGGT CATCTTTGTT
ACATCTCAAA GTTACACGTC ATACATTACT TATCAATCCG CGAAACATGA ACTGGTTGAT
CAAACCAAGG TTCTCATCAA CGATGTCTCT CATTCAATTA AAGATGCGCT CGCAACAAAG
AACAAGCAAC AAGCACAATT GATTTTGGCT GATTTCCTGA AGGAGCCAAA CGTATCACGC
GTCAAGCTTT ACGACAAAGA GAATCAGTTA TTTGCGATCT TTACTTTGGA TGGTGCGACG
CTCCCTTCGC CGACAGTGAC AGAGCGTAGT CGTCTGCATG AGGTGGGTTA CGCTCTTTCG
GCGCACTTTC TGTATGTATT AGAACCTATC ATTCATGAAG GCAAGGTTGT CGGTACAATA
CGGGTCACTA TTTCCCAGTT GCCTCTGATG GAAGTGAGAG ATGCGCTTCT CCAAGATGGG
CTGCTTTTCT TGGCTATTCT TTTGCTCAGT AGTATTGTGT TTTACATTGG TGTAGAGCGC
CGTGTACTGC GACCAATCAT TGAAGTGAAT CGTGCGCTTC AGGACGTAGC AAATGGTCAT
CATCTTACTG GCCGTATTGA GCATCGCGCA AAAGATGAAG TCGGTGAGTT GGTGTCTTCT
TTTAACTTCA TGCTCGATCG CCAACAAAGA TTGGAGAAAC AACGTAAGCA CAGCTTGGAA
GTATTAAAGC GCCGTAAAGC CTTCGCTGAA GAAGTCGTGG ACTCTATTCA AGATGCACTG
ATCGTGACTG ACAATTTAGG GCGTGTAATA CATTGCAATA GGGCGACACA TCGAATTTTT
GAAAAGACCT ACCATGGTAT AGAAACCGCT AACATTTGTG ATTTGATTCA GACTAAAACA
CCAAATGAGC TCAGACAAAT TTTGAGTCGT GGCTTAGAGT GCGATGACAT CCACCTTGAA
AATAGGGAAG GCGAACAGCA ACTGAGCCTA ACGAGCCGAC TTCTTAGCAA GCACGGCTAC
CTTTTATTCG TGATTCAAGA TATTACTGAA ATTGAAGAAG CAATGAATCG TCAGCGTGTC
GCGGGGCGTG TGTTTGAGAG CAGTCAAGAT GGACTTGTTG TACTGAATCA TCAAGGCATC
ATTACCATGG TGAACCCCGC AGTGACCAAA CTTGTTGGCT TAGATTCGGA CCAATTAGTT
GGTAAGCCAT TCATAAAATC TATTCGCTGG CGCAAACTGC AAGCCATGAT GCCAAGCATC
CTCGAGTCGA TCGATAACTA TGGCATGTGG CAAGGGGAAG TCATTGAAAA GAATCATCTA
GGTCAGCTCA TACCCATGTT CGCAAGAGTA AATCTTATCA TTAAGAGCGA AGATCAAAAT
GCGTATGACA TGGTGATTAT TTTAACCGAC CTCTCAAGTG CAAAAGAGAT GGAGCGTCTA
GAATACTTAG CTCATCACGA TGCGTTGACA GGGCTGGCGA ATCGTTCCAA GTTCCACCTA
GAGCTTGAAG AATTAGTACA AAGATCAGGC TATTTACGTG ACGAGTTTGC GGTACTTTAT
CTCGACTTGG ACGGCTTTAA AGGTATCAAC GATACTTATG GTCATGATGC GGGCGATGAA
GTGCTCAAGA TCGTTGCTAA ACGTATGACT GGTGCAACGC GGCACAGCGA TTTGATCGCA
CGCTTGTCCG GTGATGAGTT CGTAATGTTG GTTAATCCTG CCAATCAAAA AGTCGTAACA
CGAATCGCAG AACAGCTGCT TGAGACGATT TGTTCACCAA TTGAATACCG AGGCACACTC
CTTAAAGTTG GCGTTAGTAT TGGTGTGAAA CTGGTTGGCG TAAATGAACG AGATGCGACC
AGAATTCTTA AGAGCGCGGA TACTGCCATG TATCAAGCGA AGAAAGCAGG TAAAGGCCAA
GCATTTTTAA TGGGTTGCGA ATCCCCAGAT ACAGTTTAA
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| Protein sequence | MSLRAKLIWP ILAFITVIFV TSQSYTSYIT YQSAKHELVD QTKVLINDVS HSIKDALATK
NKQQAQLILA DFLKEPNVSR VKLYDKENQL FAIFTLDGAT LPSPTVTERS RLHEVGYALS
AHFLYVLEPI IHEGKVVGTI RVTISQLPLM EVRDALLQDG LLFLAILLLS SIVFYIGVER
RVLRPIIEVN RALQDVANGH HLTGRIEHRA KDEVGELVSS FNFMLDRQQR LEKQRKHSLE
VLKRRKAFAE EVVDSIQDAL IVTDNLGRVI HCNRATHRIF EKTYHGIETA NICDLIQTKT
PNELRQILSR GLECDDIHLE NREGEQQLSL TSRLLSKHGY LLFVIQDITE IEEAMNRQRV
AGRVFESSQD GLVVLNHQGI ITMVNPAVTK LVGLDSDQLV GKPFIKSIRW RKLQAMMPSI
LESIDNYGMW QGEVIEKNHL GQLIPMFARV NLIIKSEDQN AYDMVIILTD LSSAKEMERL
EYLAHHDALT GLANRSKFHL ELEELVQRSG YLRDEFAVLY LDLDGFKGIN DTYGHDAGDE
VLKIVAKRMT GATRHSDLIA RLSGDEFVML VNPANQKVVT RIAEQLLETI CSPIEYRGTL
LKVGVSIGVK LVGVNERDAT RILKSADTAM YQAKKAGKGQ AFLMGCESPD TV
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