Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05789 |
Symbol | |
ID | 5557244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 975411 |
End bp | 977549 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640910263 |
Product | hypothetical protein |
Protein accession | YP_001447910 |
Protein GI | 156977004 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein [TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein [TIGR03304] outer membrane insertion C-terminal signal |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATAAAA AATCAATTTT GTCAGCCTCT ATTCTTATCG CCCTCTCCCA AGGTGCTTAC GCTGAAGATA CATCCACATT TAATGAAGTC GTTGTATCAG CAACTCGTAC AAACCAAACT ATGGATACTG TAGCAGCTTC TGTTGCCGTT GTTTCTGAGA AAGATCTCGA AGAGAACATG GCAAAAGATC TCAATGATGT ATTCGAGTAC ACCCCTGGTG TTACGGTGAA TGGCACTCAA CGCCAAGGTG TTCAAAGCAT TAACATTCGT GGCATGGAAG GTAAACGAGT GAAAATCTTG GTGGATGGTG CATCTCAACC AGGTGTTTTC GATGGCGGCC CATACTCTTT CATCAACTCT AGTGCGGTTA CTGTAGATCC AGACATGCTA AAGAGCGTTG AGATCGTAAA AGGTGCTGCT TCTAGTTTGC ATGGTAGCGA TGCTATTGGT GGTGTTGTGG CGTTTGAAAC CAAAGATCCA AGTGATTTCT TAAAAGATGG CAAAGACTTC GGTGGTCAAG CTAAGCTTTC TTACTCTTCA GAAGACAACT CATTTAGTGA GCATGTTGCT TTGGCAAAGC AGTTTGATAA TGTTGAAGCG TTGGTAGCTT ACACACGCCG TGATGGCTCT GAACTACAAA ATTTCGCAAA AGCCCCTTAT GACGATTATT CAGTAACAGA CCAAGATTAT TACAAGAACG ATTTGTTGGT AAAACTGCAG TCGCAACTTA ATGACGATCA CCGTTTGGAG TTTTTGGGCG AAGTTATTTA CAACCAAACG GATTCAGACA TTGCGAGTTC GTCTTACAAA AACTTCAATG CTGAAGACAC AACCAAACAA AACCGTCTAG GTCTGAAACA CATTTGGTTC GCAGATTTGG CCATCTCTGA CACCATCACT TCTCAACTAA CTTGGATCAG TAAGGAAGAG AATGGCGTAA CAAATCGATT TAAAGAAGCC AGCGCAGGTC ACCCACCTTG GGTTCCAGCA AACGGTGATA ACCAGCAGAA GAAAGATTAC GAATACACGG AAGATAAAAT TGAATTTGAA ACTCAGCTAG ATAAAGAGAT TCAAAACCAC TACCTCGTGT ACGGTTTATC ATACAAACAT AGTGACATAA GCAATACTAA CCGCGAGTTT AACTCTGATC CTAATACTCC AGACAAGGTT TATGTCTACA CACCAGACGC GAAAGAACAA AGCTTTGGCC TGTTCCTTCA AGACGAAATC GCGTTGCTAA ACGACAAGCT AATTTTAACA CCGGGTGTTC GCTACGACTA CTTCTCTACC GATCCATCAG ATACGTCTGA CGAGTCATTC AAGAAGTTTA GTGACTCTGC GTTTACTGGC CGCTTAGGTG CGACTTACAA AGTGTCTCAA CCAGGGACTG TGTTCGCTCA AGTAAGCCAA GGTTTCCGAG CTCCGTCATT TGATGAGCTT TACTACACGT ATGACAACCC AGGCCATGGT TACACCAACC GACCTAACCC AGATCTAGAA TCAGAAAAGA GCTTGTCTTA CGAATTGGGT TACCGTCATA ACACAGCCGC ATCGGCAACC GAGTTCGCGC TTTACTACAG CGATTTCACG GATTTTATTG ATCAAACATC AACAAGTAAT GGCGGCTTAA CAGAGTACAC ATTCATCAAC ATCAATGAAG CAACCGTAAA AGGTGTTGAA CTGTCTAACA GCCTTGATTG GCATGCGATT GCAAGCCTTC CGCAGGGTGT TACAACGCGC GTAGCCGCTG CATACACTGA AGGTGAAGAT GGCAATGGTA ACCCACTTAA TAGTGTCAAC CCTTGGAATG CTGTGGCAGC GGTTAACTAC GACTCGCCAA ACGCGCTTTG GGGTACAAGC TTAAAAGTTA ACTACACCGC GAAGAAGTCT GACAGTGATA TCAACTCAGA TGGTAATAAT GGCGGAACTA AAGACCAAGT TGCACTACCA TCAGCGACAG TTGTTGATCT AACCGCTTAC TATAAGCCAA TGAAAGACCT GACCGTTCGT GCAGGTGTGA TGAACTTGAC GAATGAAGAG TACTACTTGT GGAACGATGT ACGTGGTGAA ACTGAGCTAA GCCGTGATAT CACGCAGGCA GAGCGTAACT ACAACATTAG TGTCAAATAC GAGTTCTAA
|
Protein sequence | MYKKSILSAS ILIALSQGAY AEDTSTFNEV VVSATRTNQT MDTVAASVAV VSEKDLEENM AKDLNDVFEY TPGVTVNGTQ RQGVQSINIR GMEGKRVKIL VDGASQPGVF DGGPYSFINS SAVTVDPDML KSVEIVKGAA SSLHGSDAIG GVVAFETKDP SDFLKDGKDF GGQAKLSYSS EDNSFSEHVA LAKQFDNVEA LVAYTRRDGS ELQNFAKAPY DDYSVTDQDY YKNDLLVKLQ SQLNDDHRLE FLGEVIYNQT DSDIASSSYK NFNAEDTTKQ NRLGLKHIWF ADLAISDTIT SQLTWISKEE NGVTNRFKEA SAGHPPWVPA NGDNQQKKDY EYTEDKIEFE TQLDKEIQNH YLVYGLSYKH SDISNTNREF NSDPNTPDKV YVYTPDAKEQ SFGLFLQDEI ALLNDKLILT PGVRYDYFST DPSDTSDESF KKFSDSAFTG RLGATYKVSQ PGTVFAQVSQ GFRAPSFDEL YYTYDNPGHG YTNRPNPDLE SEKSLSYELG YRHNTAASAT EFALYYSDFT DFIDQTSTSN GGLTEYTFIN INEATVKGVE LSNSLDWHAI ASLPQGVTTR VAAAYTEGED GNGNPLNSVN PWNAVAAVNY DSPNALWGTS LKVNYTAKKS DSDINSDGNN GGTKDQVALP SATVVDLTAY YKPMKDLTVR AGVMNLTNEE YYLWNDVRGE TELSRDITQA ERNYNISVKY EF
|
| |