Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05788 |
Symbol | |
ID | 5557243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 974290 |
End bp | 975177 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640910262 |
Product | transcriptional regulator |
Protein accession | YP_001447909 |
Protein GI | 156977003 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGAGCC CAATCACTTT AGAAGCACTT CATATTCTTG ATGCTATTGA TAGAAGAGGA AGTTTTGCTG CTGCCGCGAA CGAGTTAGAT CGCGCGCCTT CGTCACTCAG TTATCAAATA CAAAAGCTTG AACAAGACCT TGATATCAAC ATTTTTGACC GTTCAGGCCA CAAAGCACAT TTCACTGAAG CGGGAAAATT GATACTTGAA CGTGGCAGGG TGATTCTACA AGCAAGCGAA AAGCTCGTTA ATGACGCCAC CTTGCTCGCT AATGGGTGGG AGCTCGATAT TACGGTCGCG TTTGATGGCA TTATTCCGAT TTCAAACTTC TTCCCAATGG TCGACGCGCT AGCCAACGTA AGTAGTACGC GGGTAAGGTT GCAAGAAGAG ATTCTCGCGG GGGGATGGGA GTCACTCAAC GCAGGCCGTG CAGATCTGCT CGTTTGTCCT CCGCTAGACA CTTTACCTCA GGACGTAAAG GCAGAAAACA TAGGTAAAAT GAGCATGGTA TGGGTGGCTG CATCCGATCA CTATGTACAT AAACGGAGTG GTGATTTCGA TGATGCTGCG AGGGCGAAAT ACCGAGTGAT TGTGATCGCG GATACGGCAA GAGAGCAGCC AGCAATGTCG ATTAATGTTA TGCAGAAACA GCCAAGGCTC ACCGTCACGA ACTTTCCCGC GAAAGTGGAA GCACTGACTT CCGGATTGGG GATAGGCACT CTCCCAAGCC AAATTGCTCA GCCTTTGATT GAAAGTGGCG CCTTAAAGCG AATCGAAGGT ACGGAAGATC AGCCGGTCGA CATTATTCTT GCGTGGCGCA GAAACGCGAT GGGTGAAGCG AAATCATGGT GCGTTCAATA CTTAAAGAAG AATTGGAAAT TAAAGTGA
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Protein sequence | MQSPITLEAL HILDAIDRRG SFAAAANELD RAPSSLSYQI QKLEQDLDIN IFDRSGHKAH FTEAGKLILE RGRVILQASE KLVNDATLLA NGWELDITVA FDGIIPISNF FPMVDALANV SSTRVRLQEE ILAGGWESLN AGRADLLVCP PLDTLPQDVK AENIGKMSMV WVAASDHYVH KRSGDFDDAA RAKYRVIVIA DTAREQPAMS INVMQKQPRL TVTNFPAKVE ALTSGLGIGT LPSQIAQPLI ESGALKRIEG TEDQPVDIIL AWRRNAMGEA KSWCVQYLKK NWKLK
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