Gene VIBHAR_05788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05788 
Symbol 
ID5557243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp974290 
End bp975177 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content48% 
IMG OID640910262 
Producttranscriptional regulator 
Protein accessionYP_001447909 
Protein GI156977003 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGAGCC CAATCACTTT AGAAGCACTT CATATTCTTG ATGCTATTGA TAGAAGAGGA 
AGTTTTGCTG CTGCCGCGAA CGAGTTAGAT CGCGCGCCTT CGTCACTCAG TTATCAAATA
CAAAAGCTTG AACAAGACCT TGATATCAAC ATTTTTGACC GTTCAGGCCA CAAAGCACAT
TTCACTGAAG CGGGAAAATT GATACTTGAA CGTGGCAGGG TGATTCTACA AGCAAGCGAA
AAGCTCGTTA ATGACGCCAC CTTGCTCGCT AATGGGTGGG AGCTCGATAT TACGGTCGCG
TTTGATGGCA TTATTCCGAT TTCAAACTTC TTCCCAATGG TCGACGCGCT AGCCAACGTA
AGTAGTACGC GGGTAAGGTT GCAAGAAGAG ATTCTCGCGG GGGGATGGGA GTCACTCAAC
GCAGGCCGTG CAGATCTGCT CGTTTGTCCT CCGCTAGACA CTTTACCTCA GGACGTAAAG
GCAGAAAACA TAGGTAAAAT GAGCATGGTA TGGGTGGCTG CATCCGATCA CTATGTACAT
AAACGGAGTG GTGATTTCGA TGATGCTGCG AGGGCGAAAT ACCGAGTGAT TGTGATCGCG
GATACGGCAA GAGAGCAGCC AGCAATGTCG ATTAATGTTA TGCAGAAACA GCCAAGGCTC
ACCGTCACGA ACTTTCCCGC GAAAGTGGAA GCACTGACTT CCGGATTGGG GATAGGCACT
CTCCCAAGCC AAATTGCTCA GCCTTTGATT GAAAGTGGCG CCTTAAAGCG AATCGAAGGT
ACGGAAGATC AGCCGGTCGA CATTATTCTT GCGTGGCGCA GAAACGCGAT GGGTGAAGCG
AAATCATGGT GCGTTCAATA CTTAAAGAAG AATTGGAAAT TAAAGTGA
 
Protein sequence
MQSPITLEAL HILDAIDRRG SFAAAANELD RAPSSLSYQI QKLEQDLDIN IFDRSGHKAH 
FTEAGKLILE RGRVILQASE KLVNDATLLA NGWELDITVA FDGIIPISNF FPMVDALANV
SSTRVRLQEE ILAGGWESLN AGRADLLVCP PLDTLPQDVK AENIGKMSMV WVAASDHYVH
KRSGDFDDAA RAKYRVIVIA DTAREQPAMS INVMQKQPRL TVTNFPAKVE ALTSGLGIGT
LPSQIAQPLI ESGALKRIEG TEDQPVDIIL AWRRNAMGEA KSWCVQYLKK NWKLK