Gene VIBHAR_05770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05770 
Symbol 
ID5557309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp961672 
End bp962940 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content48% 
IMG OID640910244 
Producthypothetical protein 
Protein accessionYP_001447891 
Protein GI156976985 
COG category[R] General function prediction only 
COG ID[COG4128] Zonula occludens toxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCGC TCGACATTAT CGAGAAACGA CTGGGTGAAA AGTTTCCGGA CAGTGCTCGC 
CTCATTCGTA TCAGCTCGCG TAATCCTGAA GGCTTTGAGC TTTGGAAATA CTTCTTCTGT
TGGGCGCCAA TTGGGGCGTT CATCCTCATT GATGAGTGTC AGCAAATCTA CTCCACCAAT
GCAGGCTTTA AAATGGCGAA CATACACAAG CGCCCTTTTG CTGACTTTCA GCCGCATCTA
CCCGAAGGAT TCTCTGAGTT GTTTCAGTCT CGTTGGCTGA CTGTTGATAC ATCCAGTTTG
GACAATGGCG AGATAGACGA TTGCCAACGC ACACGTTTCG ACGAGCAAGG CCGAATCATC
TATCCGGAGA ACTTCAACAA TGCCTTTATG GAGCACCGGC ACTACAACTG GGACATTGTC
CTGCTCACGC CCGACTTTGC TCAAATCCCT AAAGAGTTAA AAGGTGTGGC TGAGTTGGCC
AAGCAGCACA AAGGGAAAGA CGGGATCTTC TTTTCCAACC GTAAACCTCG AATCCTAGAA
CATGACCCAA CAAGAACGGT CACCAAACCA AGCAAAGACG ATGTGGTGTA CAACCTCAAA
GTCCCGCTTG ATGTTCACCT ACTCTACGCC TCCACTGTTA CGGGGCAAAT CACTAAAGCG
GGACTTGGAA AGAACATCTT TCTTAATCCT AAATTCTTAG CAGCTATGGC ACTGATGGTG
CTTTCATTTG GGTATGTCAT TTATGCGCTT ATTGGTCTTT TTTCTGATCC TGAGACGGCA
GCTTCGCAAG GAACGCAGCC TCATCAAACT ACGCAGCAAA GTTCTGTTTC GTCTTCGCAA
AGTAAATCGA GCCCTGGGCA AACTTCTGCG GATAATTCTG TCGTGGGTTC TGGTCGTTCT
GACTGTACGG GTACTGATTG CGGGACTCGG CCTTATCATG ACATAGGCAC CGTTCCGGCT
TGGTTTCCAC TGGCCAACTC AGAAAGTATC TATGTGTCAG CCGTTGAACG TTGGCACAAA
CCCAACTCAA TTCGAGTGAG TGTCCATTTT GAGGTAATAA CACCGAGAGG TGTTAGCTAC
CTCGATGACT CGTTTCTAAA AAAGCTAGGT ATTCAAATGG ATTATCTAGA CGACTGCCTT
GTCCAGCTGT CTAGCGGTGA ATCGAACTTT TACGTGACCT GCTCCCCTTA CGAGCAATTC
GCACAAGTAC AAGAGCAAGA CATAGAACTT AAGCCAGTTG GCGGTATCTT TGGCGGGGAC
GAAACCTAA
 
Protein sequence
MQPLDIIEKR LGEKFPDSAR LIRISSRNPE GFELWKYFFC WAPIGAFILI DECQQIYSTN 
AGFKMANIHK RPFADFQPHL PEGFSELFQS RWLTVDTSSL DNGEIDDCQR TRFDEQGRII
YPENFNNAFM EHRHYNWDIV LLTPDFAQIP KELKGVAELA KQHKGKDGIF FSNRKPRILE
HDPTRTVTKP SKDDVVYNLK VPLDVHLLYA STVTGQITKA GLGKNIFLNP KFLAAMALMV
LSFGYVIYAL IGLFSDPETA ASQGTQPHQT TQQSSVSSSQ SKSSPGQTSA DNSVVGSGRS
DCTGTDCGTR PYHDIGTVPA WFPLANSESI YVSAVERWHK PNSIRVSVHF EVITPRGVSY
LDDSFLKKLG IQMDYLDDCL VQLSSGESNF YVTCSPYEQF AQVQEQDIEL KPVGGIFGGD
ET