Gene VIBHAR_05720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05720 
Symbol 
ID5557670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp922783 
End bp923460 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content46% 
IMG OID640910194 
Producthypothetical protein 
Protein accessionYP_001447841 
Protein GI156976935 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACT GGAAACTGAT TCTGCCGCTA ATGATGAGCG GTAGTCTTAT TGCTTGTACG 
TCGACACCGA CGACCACTGA GCCTGTTGAG CCAGAAAAAC CAGTCGTGGA GCAACCGGTT 
GAAAAGCCGG AAGTAAAACC TGAAGTAGAA CCAAAACCTG AGGTGAAGCC GGAACCAAAA 
CCGGAAACGA AACCTGAGAA GAAGCCAGAA CCTAAACCAG AAAAGCCAGC TAAGGTACAG 
AAAACACCTG ATGGCATGTT GATTCTAGGT GCGGAAGAGT GGGTGCACAT TCCTGCTATT 
AACCAGACTT TCAAAGGTCG TGTTGATACT GGTGCAACAA CATCTTCAAT CAGTGCGACT 
GAAGTGGTTC CATTTGAGCG TGACGGTAAA GATTGGGTTC AGTTCAAAAT TGACATCAAC 
GGTAAGGCGA GTAAAGAGTT CAAACTGCCT GTTGAGCGCT GGGCTAAAAT TCGTCAGTCT 
TCTTCAGAAG ATGTCGACAA GCGCCCAGTT GTGGTTGCCT ACATTCAAGT TGGCGACTTA 
AAAGAACAAA CCGAGTTTAC GTTAACAGAG CGTGGTCATA TGAAGTTCCC AATCTTGTTG 
GGTCGTAGCT TCTTCCGTGA CGTTGCGGTT GTGGATGTAT CTAAGAAATA CGTTCAGAAC 
AAACCAAGCG GTAAGTAA
 
Protein sequence
MKNWKLILPL MMSGSLIACT STPTTTEPVE PEKPVVEQPV EKPEVKPEVE PKPEVKPEPK 
PETKPEKKPE PKPEKPAKVQ KTPDGMLILG AEEWVHIPAI NQTFKGRVDT GATTSSISAT 
EVVPFERDGK DWVQFKIDIN GKASKEFKLP VERWAKIRQS SSEDVDKRPV VVAYIQVGDL 
KEQTEFTLTE RGHMKFPILL GRSFFRDVAV VDVSKKYVQN KPSGK