| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05679 |
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| Symbol | |
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| ID | 5557806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 887551 |
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| End bp | 889074 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640910154 |
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| Product | cytoplasmic alpha-amylase |
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| Protein accession | YP_001447804 |
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| Protein GI | 156976898 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT TCAACCTTAA ACCCACACTT TTACCTTTAA CTTTGCTGCT CAGTTCGCCA
GTAATGGCGG CTCAAAATGG AACCATGATG CAGTATTTCC ATTGGTATGT GCTAAATGAC
GGTGCACTCT GGACACAAGT TGAAAACAAC GCGCCAGCAC TATCGGAAAA CGGCTTTACC
GCGTTATGGC TACCGCCTGC CTATAAAGGT GCTGGTGGCA GCAACGACGT CGGTTATGGC
GTTTACGATA TGTATGACTT GGGGGAGTTT GATCAAAAAG GATCGGTGCG AACCAAGTAC
GGTACAAAAG ACCAATACCT CGATGCCATC AAAGCGGCAC ACGCAAACAA CATTCAAATT
TATGGTGATG TGGTGTTTAA CCACCGTGGC GGTGCGGATG GTAAATCGTG GGTCGACACC
GAGCGAGTCG ATTGGAACAA TCGGAACATT GAACTCGGCG ACAAATGGAT TGAAGCTTGG
GTCGAATTTA GCTTTCCGGG GCGTAACGAC AAATACTCAG ATTTCCATTG GACGTGGTAT
CACTTTGACG GCGTTGACTG GGATGACGCA GGTAAAGAAA AAGCGATCTT CAAATTCAAA
GGCGATGGCA AAGCATGGGA TTGGGAAGTC AGTTCTGAAA AAGGCAACTA TGACTACCTC
ATGTACGCAG ATTTAGACAT GGACCACCCA GAAGTGAAGC AAGAACTGAA AGACTGGGGC
GATTGGTACT TAAATATGAC GGGTGTGGAT GGCTTCCGAA TGGACGCAGT CAAACACATC
AAATATCAAT ACCTGCAAGA GTGGATCGAT TACTTGCGAC AGAAAACGAG CAAAGAGTTG
TTTACTGTCG GTGAGTACTG GAACTACGAC GTTAACAATC TGCACAACTT TATCACCAAG
ACGTCTGGCA GTATGTCGTT GTTTGATGCA CCGTTACACA TGAACTTCTA CAACGCTTCA
CGCTCAGGTG GTAACTTCGA CATGCGTCGT ATCATGGATG GTACCTTGAT GAAGGACAAC
CCAGTGAAAG CAGTGACTCT GGTTGAGAAC CACGATACGC AGCCTCTTCA AGCGCTAGAA
TCTCCAGTCG ATTGGTGGTT TAAGTCTCTC GCGTACGCGT TTATCTTGCT ACGTGAAGAG
GGCTATCCGT CAGTCTTTTA TGCTGATTAC TACGGCGCGC AATACAGTGA TAAAGGGCAC
GACATCAACA TGGTGAAAGT GCCGTATATT GAGAAATTGG TGAAAGCCCG TAAAGATTAT
GCTTATGGCA AGCAGCACTC TTACCTTGAT CATTGGGATG TGATTGGTTG GACGCGAGAA
GGGGATGCAG AACACCCGAA CTCAATGGCG GTTATCATGA GTGATGGCCC TGGCGGTACA
AAATGGATGT ACACAGGTTC ACCAAGTACG CGTTACGTCG ATAAGTTAGG TATTCGCACG
GAAGAAGTTT GGACTGACGC CAACGGTTGG GCAGAGTTCC CAGTGAACGG TGGTTCGGTT
TCTGTTTGGG TCGGCGTTAA ATAA
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| Protein sequence | MKTFNLKPTL LPLTLLLSSP VMAAQNGTMM QYFHWYVLND GALWTQVENN APALSENGFT
ALWLPPAYKG AGGSNDVGYG VYDMYDLGEF DQKGSVRTKY GTKDQYLDAI KAAHANNIQI
YGDVVFNHRG GADGKSWVDT ERVDWNNRNI ELGDKWIEAW VEFSFPGRND KYSDFHWTWY
HFDGVDWDDA GKEKAIFKFK GDGKAWDWEV SSEKGNYDYL MYADLDMDHP EVKQELKDWG
DWYLNMTGVD GFRMDAVKHI KYQYLQEWID YLRQKTSKEL FTVGEYWNYD VNNLHNFITK
TSGSMSLFDA PLHMNFYNAS RSGGNFDMRR IMDGTLMKDN PVKAVTLVEN HDTQPLQALE
SPVDWWFKSL AYAFILLREE GYPSVFYADY YGAQYSDKGH DINMVKVPYI EKLVKARKDY
AYGKQHSYLD HWDVIGWTRE GDAEHPNSMA VIMSDGPGGT KWMYTGSPST RYVDKLGIRT
EEVWTDANGW AEFPVNGGSV SVWVGVK
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