Gene VIBHAR_05668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05668 
Symbol 
ID5558021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp877699 
End bp878703 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content46% 
IMG OID640910143 
ProductL-allo-threonine aldolase 
Protein accessionYP_001447797 
Protein GI156976891 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTTC GATCAGATAC TGTTACGCAA CCTACCCAAG CCATGCGTGA AGCCATGTTT 
AACGCGCCTG TCGGAGACGA TGTTTACGGT GACGACCCAA GCGTTAACGA GTTAGAACAA
TTTGCTGCTG AGCTCGCTGG GTTTGAAGCT GCGTTATTCA CTTCATCTGG CACGCAGGCA
AACCTACTTG GGTTAATGGC ACATTGCGAA CGCGGTGATG AATACCTGTG TGGCCAGCAA
GCACACAACT ATAAATACGA AGCTGGTGGT GCTGCGGTAC TGGGCTCTAT TCAGCCTCAA
CCGATTGAAA ACAACCCAGA CGGCACTTTG CCATTTGATA AACTAGAAGC CGCGATTAAA
CCTGATGATG CGCACTTTGC ACGTACTCGA CTACTTAGCC TAGAGAACAC CATCAACGGT
AAAGTGATTC CTCTCTCTTA CCTTGCACAA GCACGTGAGT TCGTGAACAA GCACAATTTG
CAGATGCACC TAGATGGCGC TCGTGTATTC AACGCAGCCG TTGCACTTGA TGTTCCGGTT
AAAGAGATTG GTCAATACTT TGATTCAATG ACAATCTGTC TGTCGAAAGG GCTCGCTGCT
CCTATTGGCT CATTATTACT GGGTAATAAA GAATACATCG CTAAAGCGCG TCGCTTGAGA
AAGATGGTCG GCGGAGGCAT GCGTCAAGCG GGTATTCTTG CTGCAGCTGG TAAACTAGCC
CTTACCGAGC AAGTGGAACA ACTAAAACAA GACCACATCA ATGCAAAGAC ATTAGCGGAA
GGTTTAGCGG AATTGCCTGG TTTCTCTGTT AATCCAGAAT TTGTTCAAAC CAACATCGTT
TTTGCCAAAC TTGATCCACA AGTGGATATC GCTGGTATTG CAGAAAAGAT GAAAGAGCAA
GGCATCACGA TTACTCCAGG AAACCCAATC CGCTTCGTGA CGCATAAAGA TATTTCGGCA
CAAGACATCG ATACTTTCCT ATCTAGCCTT AAATCTATGC TTTAA
 
Protein sequence
MDFRSDTVTQ PTQAMREAMF NAPVGDDVYG DDPSVNELEQ FAAELAGFEA ALFTSSGTQA 
NLLGLMAHCE RGDEYLCGQQ AHNYKYEAGG AAVLGSIQPQ PIENNPDGTL PFDKLEAAIK
PDDAHFARTR LLSLENTING KVIPLSYLAQ AREFVNKHNL QMHLDGARVF NAAVALDVPV
KEIGQYFDSM TICLSKGLAA PIGSLLLGNK EYIAKARRLR KMVGGGMRQA GILAAAGKLA
LTEQVEQLKQ DHINAKTLAE GLAELPGFSV NPEFVQTNIV FAKLDPQVDI AGIAEKMKEQ
GITITPGNPI RFVTHKDISA QDIDTFLSSL KSML