Gene VIBHAR_05664 details

Gene Information

• Locus tag: VIBHAR_05664
• ID: 5557951
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009784
• Strand: +
• Start bp: 873811
• End bp: 874332
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640910140
• Product: lipocalin
• Protein accession: YP_001447794
• Protein GI: 156976888
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3040] Bacterial lipocalin

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCTC TTAAAACACT TTTACTTTTG TCCCTTGCAA CGTTGTTTGG CTGTACGTCT 
AAACCGGACG GCGTGGAGCC GGTCAACAAC TTTGAACTTC AACCATATCT AGGCAAGTGG 
TATGAAATTG CGCGTCTTGA TCATTCCTTT GAGCGTGGTT TATCGAATGT GACGGCTGAA 
TACGAGTTAC GTGAGGATGG TGGCGTAACG GTTATCAACC GAGGCTATTC AGAAGAAGAT 
AAAGAATGGA CGCAAGCTGA CGGCAAAGCG TATTTCGTCG ATGGTGAAAA CACAGGGCAT 
TTGAAAGTGT CTTTCTTCGG TCCATTTTAT TCGTCTTACA TCGTATTTGA GCTAGGTGAG 
AACTACGACT ACGCGTTTAT CTCTGGTTTC AATCACGACT ACCTATGGCT ACTGTCACGC 
ACACCAACCG TCGATAAAGC AACGATCGAG CGCTTCAAAA AAGTAGCAAA AGAGAAAGGC 
TTCGCGTTGG ACGAATTGAT TCTCGTAGAC CAAACCAAGT AA 

 

Protein sequence

MKSLKTLLLL SLATLFGCTS KPDGVEPVNN FELQPYLGKW YEIARLDHSF ERGLSNVTAE 
YELREDGGVT VINRGYSEED KEWTQADGKA YFVDGENTGH LKVSFFGPFY SSYIVFELGE 
NYDYAFISGF NHDYLWLLSR TPTVDKATIE RFKKVAKEKG FALDELILVD QTK