Gene VIBHAR_05658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05658 
Symbol 
ID5558000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp869255 
End bp869956 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content48% 
IMG OID640910134 
Productintegrase 
Protein accessionYP_001447788 
Protein GI156976882 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGACG AAATTCACCT TCGGTATCCG TTCATGGGGA GCAGACGCAT TCGAAATGAG 
ATGGCTAAAA AAGGCCATAA CGTTAATCGT AAACGTGTCG TTCGGCTCAT GCGAGACATG
GGCATTGGGG CTATTTACCC CAAGCCTAGA ACGACCCTAG CGAACAAAGC ACACAAGGTT
TATCCCTACC TTTTGCGTGA TATCGAAGTC ACTTACCCGA ACCAAGCTTG GGCGATTGAC
ATCACGTATA TCCCGATGGC TAAGGGGTTC CTGTATTTAG TCGCCATTAT CGACTGGTAT
AGCCGAAAGG TGCTGTCTTG GCGGCTATCC AACACCATGG ACACGAGCTT TTGTATCGAA
GCCCTTGAAG ACGCGCTTAA ACATTATGGC CCGCCAGATA TCTTCAACTC AGATCAAGGC
AGTCAGTTTA CCAGCACCGA ATTCACACAG AAGCTACTCG ACCATGGAGT CAGGATAAGT
ATGGATGGGA AAGGACGCTG GGTCGACAAT GTTTTCATAG AGCGATTATG GAGAAGCCTG
AAATATGAGG AGGTTTACTT AAAAGCTTAC ACCACGCCCC GAGAAGCAGA GCTTGAAATC
GGCCACTACA TGGTGTTTTA TAATGAGGAG CGTAACCATC AGGGACTCAA TGACCTCACT
CCTGATGAAG CCTACTTTGG TAGGCAGAGA TACGCTGCAT GA
 
Protein sequence
MIDEIHLRYP FMGSRRIRNE MAKKGHNVNR KRVVRLMRDM GIGAIYPKPR TTLANKAHKV 
YPYLLRDIEV TYPNQAWAID ITYIPMAKGF LYLVAIIDWY SRKVLSWRLS NTMDTSFCIE
ALEDALKHYG PPDIFNSDQG SQFTSTEFTQ KLLDHGVRIS MDGKGRWVDN VFIERLWRSL
KYEEVYLKAY TTPREAELEI GHYMVFYNEE RNHQGLNDLT PDEAYFGRQR YAA