Gene VIBHAR_05642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05642 
Symbol 
ID5558706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp851974 
End bp852876 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content42% 
IMG OID640910118 
Producthypothetical protein 
Protein accessionYP_001447772 
Protein GI156976866 
COG category[R] General function prediction only 
COG ID[COG1694] Predicted pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATTA ATAAAACACA AGGACAATGG ATGAATGAAT CAGTGTATCG TGCAATGTCT 
TGGCTAAAAG CAATACTGGA TGGTCAAGGG GTTCGCTACC AAATTGTTGG AGGTTTCGCC
GCCCATCTTC ATGGAGGTTC TCGGCCAATT GTTGACATCG ACCTCTATAT TGAAAAAGAG
GATGTACATG CGCTTCTACC GTTCTTTCAA CCTTTTGTAA GTAAACCGCT TAAACACTAC
TCTGAAGAAG GGTGGGACCT AGAATATCTC CAGTTGATTT ATGAAAACCA GAAAATCGAG
ATTGGTTTGA GTCCGGGAAC TAAGATCTTT AACACCTCGA GCCAACAATT GGTATCACTC
GATGTTGATT TGGCGGAATC CGTACAGCGT GACTTTCATG GGCTTGCTTT ACCTGTTATC
AATACTAACT CTCTCATTGA GTACAAAAGA GTTCTTAATC GGGAAGTCGA TCGAATCGAC
ATTAAAGAGC TGGAAGATAT CCAACAAGCT GAGAATGCTC AAACCTTGGG CCATTTCAGT
TCCTTGTTCG ACATCGCGCG GAGAAAAGCG AAATACGATA ATACCAACAC TTGGTACAAA
GGTTCGGAGA CGTACTTTGA TGCTTTATAT CAAGAGCTTG AAGAAGTCGG TGAAGAAATC
ACTCAAACAC GTCTTTGTTA TTTAGAGGAT GAGCTTGGCG ATGTGCTTTG GAACTATTTA
AATCTGCTCA TGGCATTGGA AAAAGAGCAA GGTATCGATC CTACCTCGGT ATTGAGCAGA
GCGGTTAACA AGTATCAGCA GCGAGTCGCT ACCATTGAAA ACAATGGAAG CTGGGCGGAT
GTGAAGGCCG AGCAAAAGCG AAAGTTACAA CAAGAATACC TAGGTGCGAT GAATGAAAAT
TAA
 
Protein sequence
MHINKTQGQW MNESVYRAMS WLKAILDGQG VRYQIVGGFA AHLHGGSRPI VDIDLYIEKE 
DVHALLPFFQ PFVSKPLKHY SEEGWDLEYL QLIYENQKIE IGLSPGTKIF NTSSQQLVSL
DVDLAESVQR DFHGLALPVI NTNSLIEYKR VLNREVDRID IKELEDIQQA ENAQTLGHFS
SLFDIARRKA KYDNTNTWYK GSETYFDALY QELEEVGEEI TQTRLCYLED ELGDVLWNYL
NLLMALEKEQ GIDPTSVLSR AVNKYQQRVA TIENNGSWAD VKAEQKRKLQ QEYLGAMNEN