Gene VIBHAR_05630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05630 
Symbol 
ID5558335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand- 
Start bp842476 
End bp843354 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content46% 
IMG OID640910106 
Producthypothetical protein 
Protein accessionYP_001447760 
Protein GI156976854 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCCA TTGGCGTGCG CTTTATGGTG CTGTCCGCGT TTGGTTTTGC ACTGATGTCT 
GCCACCGTAA AGCACGTTAG CTTACATGGT ATACCTGTAT TTGAAATCGT AGCTGCTAGG 
GCTCTGGTTT CGCTTGTGAT CAGCTATCTC GACGTGAAAC GCAAAGGTAT TTCTGTTTGG 
GGAAATAATA AGCCCTTGCT CTTTGCTCGC GGTGCTGTTG GAACCATGGC TTTGATGTGT 
GTGTACTATT CCGTTACAAC GCTACCACTC GCGGAAGCGA CCATTTTTCA GTACATCCAC 
CCTGTATTTA CTGCCTTACT TGCCGTTTTT TTCCTTAAAG AGCGTATCCA GTCTTCGACG 
TTTATTTGTA TCGCCTTGTG TTTACTTGGG GTATACGTCA TGGTGAGACC AGAAACTGGT 
CCAGATACGG AGCATGCCTT ACCAATGTTC AGTGTGATGA TCGCCATCTT AGGTGCTTTT 
GGTAGCTCCA TCGCGTACGT AATCGTACGT AAGTTGAGTC AGACTGAAGA CAGCTCCGTG 
ATCATATTTT ACTTCCCGTT GGTGGCACTG CCGGCATCGA TTCTTTTGAT TGGGGATCAA 
TTCGTCATGC CAGATTTGTA TCTAACCATG ATGCTAGTTT TGGTCGGCGT CTTTACTCAG 
ATAGGACAGT TGGGATTAAC AAAGGCAATG CAAACACAAG AAGCAGGAAA AGCATCAGCC 
TACTCTTATG TTCAGATCAT TTTCTCTGTC GTTTTGGGCA TCGTCTTCTT TGGTGAATTA 
CCTTCGGCGT GGACATACTT AGGTGGCGCA TTAATCGTGA CAGGTGCGCT GATCAACGTA 
TTTGGTCAGC ATCTCAAGTT GCCGTTTATA AAACGATAG
 
Protein sequence
MIPIGVRFMV LSAFGFALMS ATVKHVSLHG IPVFEIVAAR ALVSLVISYL DVKRKGISVW 
GNNKPLLFAR GAVGTMALMC VYYSVTTLPL AEATIFQYIH PVFTALLAVF FLKERIQSST 
FICIALCLLG VYVMVRPETG PDTEHALPMF SVMIAILGAF GSSIAYVIVR KLSQTEDSSV 
IIFYFPLVAL PASILLIGDQ FVMPDLYLTM MLVLVGVFTQ IGQLGLTKAM QTQEAGKASA 
YSYVQIIFSV VLGIVFFGEL PSAWTYLGGA LIVTGALINV FGQHLKLPFI KR